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SCNpilot_expt_1000_bf_scaffold_3996

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3996_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..741)
DNA (741bp) protein (247aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHY7_RHITR
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
SCNpilot_expt_1000_bf_scaffold_3996_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(902..1648)
DNA (747bp) protein (249aa)
Putative cytochrome c oxidase biogenesis protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJS8_RHITR rbh
putative cytochrome c oxidase biogenesis protein rbh
Putative cytochrome c oxidase biogenesis protein {ECO:0000313|EMBL:AGB70330.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1656..2075)
DNA (420bp) protein (140aa)
Cytochrome c oxidase subunit 3 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJQ5_RHITR
cytochrome c oxidase subunit 3
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:AGB70329.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2225..2875
DNA (651bp) protein (217aa)
Chloramphenicol phosphotransferase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ7_RHITR rbh
chloramphenicol phosphotransferase family protein rbh
Chloramphenicol phosphotransferase family protein {ECO:0000313|EMBL:AGB70328.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2900..3274)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SHS9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ24803.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3996_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3418..4326)
DNA (909bp) protein (303aa)
Cytochrome c oxidase subunit 3 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJS3_RHITR rbh
cytochrome c oxidase subunit 3 rbh
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:AGB70325.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4360..4971)
DNA (612bp) protein (204aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7D7_9RHIZ rbh
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
cytochrome c oxidase assembly protein CtaG rbh
SCNpilot_expt_1000_bf_scaffold_3996_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4981..5121)
DNA (141bp) protein (47aa)
Putative transmembrane protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ1_RHITR
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AGB70323.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5118..6077)
DNA (960bp) protein (320aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Protoheme IX farnesyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGH5_RHITR rbh
cyoE; protoheme IX farnesyltransferase rbh
SCNpilot_expt_1000_bf_scaffold_3996_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6136..7167)
DNA (1032bp) protein (344aa)
Cytochrome c oxidase, subunit I n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U943_9RHIZ
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ENN89064.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
coxA; cytochrome c oxidase, subunit I
SCNpilot_expt_1000_bf_scaffold_3996_11
Nephotettix virescens, Nephotettix, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

7326..7526
DNA (201bp) protein (67aa)
Cytochrome oxidase subunit I (Fragment) n=2 Tax=Bemisia tabaci RepID=V5KDZ9_BEMTA
hypothetical protein
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:BAP16792.1}; TaxID=1032906 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Membracoidea; Cicadellidae; Deltocephalinae; Nephotettix.;" source="Nephotettix virescens.;"
SCNpilot_expt_1000_bf_scaffold_3996_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7792..8682)
DNA (891bp) protein (297aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJS1_RHITR rbh
coxB; cytochrome c oxidase, subunit II rbh
SCNpilot_expt_1000_bf_scaffold_3996_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9020..9643
DNA (624bp) protein (208aa)
Invasion associated locus B (IalB) family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJP4_RHITR rbh
invasion associated locus B (IalB) family protein rbh
Invasion associated locus B (IalB) family protein {ECO:0000313|EMBL:AGB70319.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9708..11123
DNA (1416bp) protein (472aa)
Zinc-dependent protease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFY6_RHITR rbh
zinc-dependent protease protein rbh
Zinc-dependent protease protein {ECO:0000313|EMBL:AGB70318.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11154..11459)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5G4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89060.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3996_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11568..12854)
DNA (1287bp) protein (429aa)
D-alanyl-D-alanine carboxypeptidase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHX4_RHITR rbh
D-alanyl-D-alanine carboxypeptidase protein rbh
D-alanyl-D-alanine carboxypeptidase protein {ECO:0000313|EMBL:AGB70316.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13082..14122
DNA (1041bp) protein (347aa)
Polysaccharide deacetylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJR6_RHITR rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:AGB70315.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_3996_18
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14223..14843)
DNA (621bp) protein (207aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VDE1_9RHIZ rbh
pdxH; pyridoxamine 5'-phosphate oxidase rbh
SCNpilot_expt_1000_bf_scaffold_3996_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14908..15141
DNA (234bp) protein (78aa)
Putative lipoprotein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFY1_RHITR
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AGB70313.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 19 items

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