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SCNpilot_expt_1000_bf_scaffold_9671

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9671_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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629..1843
DNA (1215bp) protein (405aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Fumarate hydratase class II n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ28_RHITR
fumC; fumarate hydratase, class II
SCNpilot_expt_1000_bf_scaffold_9671_2
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2005..2607)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI0003764210
Uncharacterized protein {ECO:0000313|EMBL:KJF73984.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
conserved exported protein of unknown function
SCNpilot_expt_1000_bf_scaffold_9671_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3370..3564)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG07439.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_1000_bf_scaffold_9671_4
unknown

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comp(3604..3798)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9671_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3930..4520
DNA (591bp) protein (197aa)
Fumarate hydratase class I n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VDV1_9RHIZ
Fumarate hydratase class I {ECO:0000313|EMBL:ENN89252.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
fumarate hydratase class I
SCNpilot_expt_1000_bf_scaffold_9671_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4733..5752
DNA (1020bp) protein (340aa)
GGDEF domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMX2_RHITR rbh
GGDEF domain-containing protein rbh
GGDEF domain-containing protein {ECO:0000313|EMBL:AGB71425.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5807..5956)
DNA (150bp) protein (50aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL35_RHITR
pyridoxamine 5'-phosphate oxidase family protein
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AGB71426.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5989..6414)
DNA (426bp) protein (142aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL35_RHITR
pyridoxamine 5'-phosphate oxidase family protein
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AGB71426.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6474..7865)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJK9_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB71427.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_10
unknown

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8544..9224
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9671_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9193..9567)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMX7_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71430.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9701..10750
DNA (1050bp) protein (350aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL40_RHITR rbh
moaA; molybdenum cofactor biosynthesis protein A rbh
SCNpilot_expt_1000_bf_scaffold_9671_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10769..11521
DNA (753bp) protein (251aa)
Beta-lactamase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJL3_RHITR rbh
beta-lactamase family protein rbh
Beta-lactamase family protein {ECO:0000313|EMBL:AGB71432.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11595..14147)
DNA (2553bp) protein (851aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ39_RHITR rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGB71433.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15039..15371
DNA (333bp) protein (111aa)
Putative transporter protein, RhaT family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMU7_RHITR
putative transporter protein, RhaT family
Putative transporter protein, RhaT family {ECO:0000313|EMBL:AGB71434.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15382..16032
DNA (651bp) protein (217aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
Molybdenum cofactor guanylyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMY1_RHITR rbh
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A rbh
SCNpilot_expt_1000_bf_scaffold_9671_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16029..16559
DNA (531bp) protein (177aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL47_RHITR rbh
mobB; molybdopterin-guanine dinucleotide biosynthesis protein B rbh
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:AGB71436.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_9671_18
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16603..17091)
DNA (489bp) protein (163aa)
OmpA/MotB domain protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VDW4_9RHIZ
OmpA/MotB domain protein {ECO:0000313|EMBL:ENN89267.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
OmpA family protein
Displaying 18 items

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