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SCNpilot_expt_1000_bf_scaffold_5552

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5552_1
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..615
DNA (615bp) protein (205aa)
Putative multidrug transport protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TXP7_9RHIZ
Putative multidrug transport protein {ECO:0000313|EMBL:ENN85194.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
multidrug transport protein
SCNpilot_expt_1000_bf_scaffold_5552_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(642..1436)
DNA (795bp) protein (265aa)
Galactonate operon transcriptional repressor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LT03_RHITR rbh
galactonate operon transcriptional repressor rbh
Galactonate operon transcriptional repressor {ECO:0000313|EMBL:AGB74423.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5552_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1852..3315
DNA (1464bp) protein (488aa)
Putative major facilitator superfamily (MFS) drug efflux transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW91_RHITR rbh
putative major facilitator superfamily (MFS) drug efflux transporter rbh
Putative major facilitator superfamily (MFS) drug efflux transporter {ECO:0000313|EMBL:AGB74424.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5552_4
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3337..3477)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2D2S1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK83954.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_1000_bf_scaffold_5552_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3731..4777
DNA (1047bp) protein (349aa)
Sorbitol dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWB2_RHITR rbh
sorbitol dehydrogenase rbh
Sorbitol dehydrogenase {ECO:0000313|EMBL:AGB74425.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5552_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4946..5770
DNA (825bp) protein (275aa)
Inner membrane protein YbaL n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUP3_RHITR
inner membrane protein YbaL
Inner membrane protein YbaL {ECO:0000313|EMBL:AGB74426.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5552_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5770..6717
DNA (948bp) protein (316aa)
Putative cation efflux transmembrane transport protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TXQ1_9RHIZ rbh
Putative cation efflux transmembrane transport protein {ECO:0000313|EMBL:ENN85199.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
inner membrane protein YbaL rbh
SCNpilot_expt_1000_bf_scaffold_5552_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6733..7668)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UU38_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN85200.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative acetamidase/formamidase rbh
SCNpilot_expt_1000_bf_scaffold_5552_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7741..8802)
DNA (1062bp) protein (354aa)
poly(beta-D-mannuronate) lyase (EC:4.2.2.3); K01729 poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
Poly(Beta-D-mannuronate) lyase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6V7_ACISM
Alginate lyase {ECO:0000313|EMBL:CDN55922.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_expt_1000_bf_scaffold_5552_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9032..9496)
DNA (465bp) protein (155aa)
Transcriptional regulator protein DarR n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LT09_RHITR
transcriptional regulator protein DarR
Transcriptional regulator protein DarR {ECO:0000313|EMBL:AGB74428.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5552_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10088..10759
DNA (672bp) protein (224aa)
Putative isonitrile hydratase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW96_RHITR rbh
putative isonitrile hydratase rbh
Putative isonitrile hydratase {ECO:0000313|EMBL:AGB74429.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5552_12
unknown

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10944..11123
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 12 items

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