ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12061

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12061_1
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..250)
DNA (249bp) protein (83aa)
Isochorismatase hydrolase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PWG4_9RHIZ
Isochorismatase hydrolase {ECO:0000313|EMBL:CDM61750.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
isochorismatase hydrolase
SCNpilot_expt_1000_bf_scaffold_12061_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

456..1379
DNA (924bp) protein (308aa)
arcB; ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] rbh
ornithine cyclodeaminase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003810E7F rbh
Ornithine cyclodeaminase {ECO:0000313|EMBL:AHF84563.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_expt_1000_bf_scaffold_12061_3
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(1392..1760)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TAV4_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF27013.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_expt_1000_bf_scaffold_12061_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1891..2394
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VCC2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN88672.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
NUDIX hydrolase
SCNpilot_expt_1000_bf_scaffold_12061_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2657..3013
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035CD591
Adenylate kinase-like kinase {ECO:0000313|EMBL:EJJ26595.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
DNA topology modulation kinase FlaR-like protein
SCNpilot_expt_1000_bf_scaffold_12061_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3010..3270
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000368E9C3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM27624.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_1000_bf_scaffold_12061_7
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3482..5146)
DNA (1665bp) protein (555aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Burkholderia cenocepacia H111 RepID=G7HA69_9BURK rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHL08724.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
ABC transporter related rbh
SCNpilot_expt_1000_bf_scaffold_12061_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5439..5759)
DNA (321bp) protein (107aa)
2Fe-2S ferredoxin n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW32_RHITR
2Fe-2S ferredoxin
2Fe-2S ferredoxin {ECO:0000313|EMBL:AGB74364.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12061_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5875..6408)
DNA (534bp) protein (178aa)
Cytochrome p450-like enzyme n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V686_9RHIZ rbh
Cytochrome p450-like enzyme {ECO:0000313|EMBL:ENN88661.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
cytochrome P450 superfamily rbh
Displaying 9 items

View Taxonomy