ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12576

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12576_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..136
DNA (135bp) protein (45aa)
sun; tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J7M0_AGRRK
tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein {ECO:0000313|EMBL:ACM25192.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_1000_bf_scaffold_12576_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

446..1735
DNA (1290bp) protein (430aa)
Putative metallo peptidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEI4_RHITR rbh
putative metallo peptidase rbh
Putative metallo peptidase {ECO:0000313|EMBL:AGB69798.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12576_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1781..3286
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LF56_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB69797.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12576_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3286..4395
DNA (1110bp) protein (370aa)
Imelysin superfamily protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGG9_RHITR rbh
imelysin superfamily protein rbh
Imelysin superfamily protein {ECO:0000313|EMBL:AGB69796.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12576_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5305..5481
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VE91_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89427.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12576_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5812..6072
DNA (261bp) protein (87aa)
Thioesterase superfamily protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LF52_RHITR
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:AGB69792.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12576_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6371..6691
DNA (321bp) protein (107aa)
Putative S-adenosylhomocysteine nucleosidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LGG4_RHITR
putative S-adenosylhomocysteine nucleosidase
Putative S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:AGB69791.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12576_8
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7502..7876)
DNA (375bp) protein (125aa)
Cytosine deaminase n=2 Tax=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) RepID=H3SYR5_PSEAE
Cytosine deaminase {ECO:0000313|EMBL:ETW14695.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
SCNpilot_expt_1000_bf_scaffold_12576_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7909..8337
DNA (429bp) protein (143aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Rhizobium sp. CF142 RepID=J1TGK7_9RHIZ
Displaying 9 items

View Taxonomy