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SCNpilot_expt_1000_bf_scaffold_30621

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_30621_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..611)
DNA (609bp) protein (203aa)
Ribose ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKM7_AGRRK
rbsCch4; ribose ABC transporter; K02057 simple sugar transport system permease protein
Ribose ABC transporter {ECO:0000313|EMBL:ACM30469.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_1000_bf_scaffold_30621_2
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1147..1776
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium 229E RepID=U4VB44_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERM03225.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_30621_3
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1725..2066)
DNA (342bp) protein (114aa)
sugar ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC-type sugar transport system, ATPase component n=1 Tax=Rhizobium sp. AP16 RepID=J2D988_9RHIZ
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:EJK86404.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_1000_bf_scaffold_30621_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2139..3146)
DNA (1008bp) protein (336aa)
Sugar ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JKM5_AGRRK rbh
sugar ABC transporter; K02058 simple sugar transport system substrate-binding protein rbh
Sugar ABC transporter {ECO:0000313|EMBL:ACM30467.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_1000_bf_scaffold_30621_5
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3110..3361)
DNA (252bp) protein (84aa)
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKM4_AGRRK
transcriptional regulator protein
Transcriptional regulator {ECO:0000313|EMBL:EJK86402.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_expt_1000_bf_scaffold_30621_6
Asaia platycodi, Asaia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4322..5200
DNA (879bp) protein (293aa)
D-tagatose 3-epimerase {ECO:0000313|EMBL:CDG38621.1}; EC=5.3.1.- {ECO:0000313|EMBL:CDG38621.1};; TaxID=1382230 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Asaia.;" source="Asaia platycodi SF2.1.;"
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003702B5F
epimerase
SCNpilot_expt_1000_bf_scaffold_30621_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5279..6001)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSR0_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB74338.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_30621_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6315..6494)
DNA (180bp) protein (60aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BDP8_RHILV
Transcriptional regulator {ECO:0000313|EMBL:EJC64055.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
catR1; transcriptional regulator catR
Displaying 8 items

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