ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12072_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(5800..6048)

Top 3 Functional Annotations

Value Algorithm Source
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS36_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 82.0
  • Bit_score: 150
  • Evalue 8.20e-34
resistance nodulation cell division (RND) drug efflux pump, inner membrane component similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 82.0
  • Bit_score: 150
  • Evalue 2.60e-34
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component {ECO:0000313|EMBL:AGB72945.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 82.0
  • Bit_score: 150
  • Evalue 1.20e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
TTGCGCCTGCGCCCGATCCTGATGACGGCGTTTGCCTTCATCTTCGGTGTCGTGCCGCTGATGATCGCCACCGGCCCGGGCGCGGAAATGCGCCAGTCGCTCGGCACGGCCGTATTCTCAGGCATGCTCGGGGTGACGCTGTTCGGGCTGTTCCTGACGCCGGTGTTCTATGTCGTCCTGCGCCGGCGGCGCAAGCAGGAGGAGGCAGCCGCGGAGGAGCCATCGGCAACGGACGCCGCGGCGCAATGA
PROTEIN sequence
Length: 83
LRLRPILMTAFAFIFGVVPLMIATGPGAEMRQSLGTAVFSGMLGVTLFGLFLTPVFYVVLRRRRKQEEAAAEEPSATDAAAQ*