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SCNpilot_expt_1000_bf_scaffold_12072

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12072_1
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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601..1626
DNA (1026bp) protein (342aa)
aldose-1-epimerase, putative (EC:5.1.3.3) rbh
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
Aldose 1-epimerase n=1 Tax=Ricinus communis RepID=B9TG53_RICCO rbh
SCNpilot_expt_1000_bf_scaffold_12072_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2816..3523
DNA (708bp) protein (236aa)
Glucosamine--fructose-6-phosphate aminotransferase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNW3_RHITR rbh
glucosamine--fructose-6-phosphate aminotransferase protein rbh
Glucosamine--fructose-6-phosphate aminotransferase protein {ECO:0000313|EMBL:AGB72942.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12072_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3523..4680
DNA (1158bp) protein (386aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNH3_RHITR rbh
nagA; N-acetylglucosamine-6-phosphate deacetylase rbh
SCNpilot_expt_1000_bf_scaffold_12072_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4969..5484
DNA (516bp) protein (172aa)
Sugar isomerase (SIS) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS03_RHITR
sugar isomerase (SIS)
Sugar isomerase (SIS) {ECO:0000313|EMBL:AGB72944.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12072_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5481..5690
DNA (210bp) protein (70aa)
Sugar isomerase (SIS) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS03_RHITR
sugar isomerase (SIS)
Sugar isomerase (SIS) {ECO:0000313|EMBL:AGB72944.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12072_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5800..6048)
DNA (249bp) protein (83aa)
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS36_RHITR
resistance nodulation cell division (RND) drug efflux pump, inner membrane component
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component {ECO:0000313|EMBL:AGB72945.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12072_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6089..8992)
DNA (2904bp) protein (968aa)
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS36_RHITR rbh
Resistance nodulation cell division (RND) drug efflux pump, inner membrane component {ECO:0000313|EMBL:AGB72945.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
resistance nodulation cell division (RND) drug efflux pump, inner membrane component rbh
SCNpilot_expt_1000_bf_scaffold_12072_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8989..9300)
DNA (312bp) protein (104aa)
Resistance nodulation cell division (RND) drug efflux pump, MFP component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQE5_RHITR
resistance nodulation cell division (RND) drug efflux pump, MFP component
Resistance nodulation cell division (RND) drug efflux pump, MFP component {ECO:0000313|EMBL:AGB72946.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_12072_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10472..11197)
DNA (726bp) protein (242aa)
Putative ABC transporter, ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U1D4_9RHIZ
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ENN84163.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ABC transporter, ATP-binding protein
Displaying 9 items

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