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SCNpilot_expt_1000_bf_scaffold_12072_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(8989..9300)

Top 3 Functional Annotations

Value Algorithm Source
Resistance nodulation cell division (RND) drug efflux pump, MFP component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQE5_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 103.0
  • Bit_score: 200
  • Evalue 6.70e-49
resistance nodulation cell division (RND) drug efflux pump, MFP component similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 103.0
  • Bit_score: 200
  • Evalue 2.10e-49
Resistance nodulation cell division (RND) drug efflux pump, MFP component {ECO:0000313|EMBL:AGB72946.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 103.0
  • Bit_score: 200
  • Evalue 9.30e-49

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GTGCAGGGTTCCAACAGCTACAAGGCGATCCTCGTTCCGGACGAAGCCATCGGTTCGGACCAGAACCAGCGTGTCGTCTACACCGTCGATACCGCCGGTAATATTACGCCGAAGTCCGTCCGTCTCGGACCGAAGCTCTATGGCTATCGCGTCATTCGCGACGGCATGACCGGTGACGAGACCATCATCGTCAACGGCCTGATGCGCGTGCGGCCTGGCGTCAAGGTTTCGCCGCAGCTGATCGAACTGCCGCAGCAGGCGACCAACGACGAGCCGCCTGCTCAGGCGGATGCACAGGGGACGGATCAATGA
PROTEIN sequence
Length: 104
VQGSNSYKAILVPDEAIGSDQNQRVVYTVDTAGNITPKSVRLGPKLYGYRVIRDGMTGDETIIVNGLMRVRPGVKVSPQLIELPQQATNDEPPAQADAQGTDQ*