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SCNPILOT_CONT_300_BF_Rhizobiales_59_19

SCNPILOT_EXPT_1000_BF_Rhizobium_59_4
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Rhizobium  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 451-500 of 1356 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_12705
Genus: Rhizobium (60%)
5 5208 bp 59.68 4.56 91.36
SCNpilot_expt_1000_bf_scaffold_25674
Species: Rhizobium freirei (50%)
4 1698 bp 57.77 4.56 85.51
SCNpilot_expt_1000_bf_scaffold_9186
Species: Rhizobium tropici (80%)
5 5425 bp 58.58 4.56 81.57
SCNpilot_expt_1000_bf_scaffold_11930
Species: Rhizobium tropici (55.56%)
9 6580 bp 60.94 4.56 87.04
SCNpilot_expt_1000_bf_scaffold_20152
Order: Rhizobiales (50%)
4 2085 bp 57.89 4.56 74.10
SCNpilot_expt_1000_bf_scaffold_19392
Genus: Rhizobium (60%)
5 2750 bp 60.69 4.55 80.95
SCNpilot_expt_1000_bf_scaffold_9478
Genus: Sphingobium (50%)
4 3846 bp 65.55 4.55 85.73
SCNpilot_expt_1000_bf_scaffold_7942
Species: Sphingomonas sp. WHSC-8 (50%)
4 4397 bp 61.06 4.55 87.74
SCNpilot_expt_1000_bf_scaffold_14095
Species: Rhizobium tropici (50%)
4 2805 bp 53.80 4.55 43.21
SCNpilot_expt_1000_bf_scaffold_17336
Genus: Rhizobium (66.67%)
3 2364 bp 61.46 4.55 88.58
SCNpilot_expt_1000_bf_scaffold_44147
Species: Ensifer adhaerens (100%)
2 1046 bp 56.69 4.54 100.10
SCNpilot_expt_1000_bf_scaffold_30064
Order: Sphingomonadales (66.67%)
3 1488 bp 64.31 4.54 72.98
SCNpilot_expt_1000_bf_scaffold_18275
Species: Rhizobium sp. R2-400B4 (66.67%)
3 2260 bp 54.65 4.54 70.62
SCNpilot_expt_1000_bf_scaffold_22085
Class: Alphaproteobacteria (66.67%)
3 2477 bp 58.66 4.54 81.39
SCNpilot_expt_1000_bf_scaffold_18304
Species: Rhizobium tropici (75%)
4 2755 bp 60.73 4.54 100.29
SCNpilot_expt_1000_bf_scaffold_9040
Genus: Rhizobium (60%)
10 9085 bp 59.41 4.54 69.15
SCNpilot_expt_1000_bf_scaffold_21078
Species: Rhizobium tropici (75%)
8 5346 bp 63.06 4.54 92.37
SCNpilot_expt_1000_bf_scaffold_26499
Species: Rhizobium tropici (100%)
1 1655 bp 59.21 4.53 97.52
SCNpilot_expt_1000_bf_scaffold_8802
Genus: Rhizobium (50%)
10 6739 bp 59.91 4.53 88.72
SCNpilot_expt_1000_bf_scaffold_7712
Genus: Rhizobium (60%)
5 4913 bp 60.13 4.53 86.77
SCNpilot_expt_1000_bf_scaffold_13148
Species: Rhizobium tropici (71.43%)
7 5466 bp 58.96 4.53 84.80
SCNpilot_expt_1000_bf_scaffold_10469
Species: Rhizobium freirei (57.14%)
7 4140 bp 60.77 4.53 92.90
SCNpilot_expt_1000_bf_scaffold_14375
Species: Rhizobium tropici (55.56%)
9 3751 bp 58.38 4.53 85.90
SCNpilot_expt_1000_bf_scaffold_17194
Species: Rhizobium tropici (50%)
6 2380 bp 59.33 4.52 90.13
SCNpilot_expt_1000_bf_scaffold_15323
Domain: Bacteria (50%)
8 3261 bp 57.10 4.52 69.73
SCNpilot_expt_1000_bf_scaffold_34448
Species: Rhizobium tropici (50%)
2 1328 bp 59.56 4.52 69.35
SCNpilot_expt_1000_bf_scaffold_19808
Genus: Rhizobium (100%)
3 2711 bp 57.76 4.52 86.09
SCNpilot_expt_1000_bf_scaffold_8412
Genus: Rhizobium (50%)
6 4200 bp 62.86 4.52 90.71
SCNpilot_expt_1000_bf_scaffold_7990
Species: Rhizobium freirei (50%)
6 4374 bp 60.79 4.52 90.67
SCNpilot_expt_1000_bf_scaffold_26153
Genus: Rhizobium (100%)
7 3760 bp 61.68 4.52 89.12
SCNpilot_expt_1000_bf_scaffold_23114
Species: Rhizobium tropici (50%)
8 6032 bp 60.48 4.52 69.88
SCNpilot_expt_1000_bf_scaffold_36348
Species: Rhizobium grahamii (50%)
2 1272 bp 59.83 4.52 77.59
SCNpilot_expt_1000_bf_scaffold_32728
Species: Rhizobium leguminosarum (50%)
4 1384 bp 56.29 4.52 73.70
SCNpilot_expt_1000_bf_scaffold_23401
Species: Nitratireductor indicus (50%)
6 3706 bp 58.96 4.52 93.42
SCNpilot_expt_1000_bf_scaffold_43477
Species: Rhizobium tropici (50%)
4 1663 bp 62.42 4.51 90.02
SCNpilot_expt_1000_bf_scaffold_38187
Species: Agrobacterium rhizogenes (100%)
1 1220 bp 52.30 4.51 70.33
SCNpilot_expt_1000_bf_scaffold_27813
Species: Sinorhizobium americanum (66.67%)
3 2105 bp 61.24 4.51 93.21
SCNpilot_expt_1000_bf_scaffold_19897
Species: Rhizobium freirei (50%)
4 2106 bp 61.16 4.51 90.31
SCNpilot_expt_1000_bf_scaffold_6851
Genus: Rhizobium (50%)
10 6707 bp 58.55 4.51 80.65
SCNpilot_expt_1000_bf_scaffold_18684
Species: Rhizobium tropici (100%)
8 4486 bp 61.06 4.51 84.40
SCNpilot_expt_1000_bf_scaffold_18529
Species: Rhizobium tropici (100%)
3 3436 bp 59.02 4.51 74.65
SCNpilot_expt_1000_bf_scaffold_15930
Species: Rhizobium freirei (50%)
4 3103 bp 59.04 4.51 78.02
SCNpilot_expt_1000_bf_scaffold_3912
Species: Rhizobium tropici (100%)
9 7828 bp 62.30 4.50 89.72
SCNpilot_expt_1000_bf_scaffold_12993
Genus: Rhizobium (80%)
5 3003 bp 59.57 4.50 77.82
SCNpilot_expt_1000_bf_scaffold_6797
Genus: Rhizobium (72.73%)
11 7717 bp 57.64 4.50 76.93
SCNpilot_expt_1000_bf_scaffold_33308
Phylum: Proteobacteria (66.67%)
3 1782 bp 55.56 4.49 66.33
SCNpilot_expt_1000_bf_scaffold_41913
Species: Ensifer adhaerens (100%)
1 1113 bp 57.14 4.49 76.28
SCNpilot_expt_1000_bf_scaffold_28031
Species: Rhizobium tropici (66.67%)
3 2060 bp 57.28 4.49 65.53
SCNpilot_expt_1000_bf_scaffold_4400
Species: Rhizobium tropici (100%)
6 6730 bp 57.90 4.49 78.28
SCNpilot_expt_1000_bf_scaffold_43709
Species: Rhizobium tropici (100%)
1 1058 bp 60.87 4.49 99.81
Displaying items 451-500 of 1356 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.