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SCNpilot_expt_1000_bf_scaffold_2182

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2182_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3..698
DNA (696bp) protein (232aa)
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2182_2
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

709..3795
DNA (3087bp) protein (1029aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB5_GALCS rbh
CzcA family heavy metal efflux pump rbh
Tax=GWA2_Gallionellales_54_124_curated
SCNpilot_expt_1000_bf_scaffold_2182_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3850..4191
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II id=1341260 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrogen regulatory protein P-II
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2182_4
unknown

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comp(4341..4508)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2182_5
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4753..6069
DNA (1317bp) protein (439aa)
Outer membrane efflux protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI3_GALCS rbh
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_expt_1000_bf_scaffold_2182_6
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6079..7668
DNA (1590bp) protein (530aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI4_GALCS rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_expt_1000_bf_scaffold_2182_7
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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7678..8019
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI5_GALCS
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ADL54961.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
SCNpilot_expt_1000_bf_scaffold_2182_8

Not on your lists

comp(9349..9531)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DIN8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97947.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_1000_bf_scaffold_2182_9
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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11257..11565
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI7_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL54963.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
SCNpilot_expt_1000_bf_scaffold_2182_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11614..13953
DNA (2340bp) protein (780aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2182_11
unknown

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comp(13972..14142)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2182_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14202..16310)
DNA (2109bp) protein (703aa)
TonB-dependent siderophore receptor id=1317129 bin=GWE1_T_denit_62_9 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
TonB-dependent receptor, plug
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2182_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16419..16838)
DNA (420bp) protein (140aa)
Putative biopolymer transport protein id=1317130 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2182_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16838..17593)
DNA (756bp) protein (252aa)
flagellar motor protein MotA n=1 Tax=Thiobacillus denitrificans RepID=UPI000372CEAE
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2182_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17597..18313)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036243FB
periplasmic protein TonB; K03832 periplasmic protein TonB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2182_16
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18720..19535
DNA (816bp) protein (272aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWA2_Gallionellales_54_124_curated
Displaying 16 items

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