name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2938_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(981..2138)
|
TonB-dependent Receptor Plug domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WWM3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJP73531.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
TonB-dependent receptor-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2117..3007)
|
hypothetical protein, partial n=1 Tax=Sphingomonas wittichii RepID=UPI000363A414
Uncharacterized protein {ECO:0000313|EMBL:AJP73531.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
TonB-dependent receptor, plug
|
|
SCNpilot_expt_1000_bf_scaffold_2938_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3352..4704
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002ECCD0A
rbh
Multidrug transporter MATE {ECO:0000313|EMBL:AJP74672.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
MatE family transporter; K03327 multidrug resistance protein, MATE family
|
|
SCNpilot_expt_1000_bf_scaffold_2938_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4685..5071)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003014E5E
Uncharacterized protein {ECO:0000313|EMBL:AJP73532.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5554..6255
|
cell division protein FtsE n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB1A
rbh
Cell division protein FtsE {ECO:0000313|EMBL:AJP73533.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative ATPase involved in cell division
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2938_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6252..7136
|
permease n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD038
rbh
Permease {ECO:0000313|EMBL:AJP73534.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ftsX; cell division protein; K09811 cell division transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7133..7663
|
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630AB3
Uncharacterized protein {ECO:0000313|EMBL:AJP73535.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_8
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7663..8346
|
glycerol acyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003196861
rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:GAM01448.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
phospholipid/glycerol acyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_2938_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8466..9374)
|
cyclohexadienyl dehydrogenase (EC:1.3.1.12); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
rbh
cyclohexadienyl dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI0002630B30
rbh
Putative prephenate dehydrogenase {ECO:0000313|EMBL:GAO40207.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9374..10471)
|
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036E7E3E
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2938_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10556..12103
|
Monoamine oxidase (EC:1.4.3.4)
rbh
amine oxidase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCAD9
rbh
Amine oxidase {ECO:0000313|EMBL:AJP73539.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12136..13272
|
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
metX; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
homoserine O-acetyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630B32
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2938_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13269..13706
|
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003623FF9
GNAT family acetyltransferase {ECO:0000313|EMBL:AJP73541.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
N-acetyltransferase GCN5
|
|
SCNpilot_expt_1000_bf_scaffold_2938_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13703..14287
|
methionine biosynthesis protein MetW n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FACBA4
rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:AJP73542.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
metW; SAM-dependent methyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_2938_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14907..15137
|
nuclease PIN n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DF3F54
Nuclease PIN {ECO:0000313|EMBL:AJP73543.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Pirin-like protein; K06911
|
|
SCNpilot_expt_1000_bf_scaffold_2938_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15148..15525)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EA124B
Uncharacterized protein {ECO:0000313|EMBL:AJP73544.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15587..16159)
|
single-stranded DNA-binding protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630DA8
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_18
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16201..16374
|
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630DA9
Uncharacterized protein {ECO:0000313|EMBL:KKB83503.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16433..18283)
|
iron transporter FeoB n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030BA9C7
rbh
Iron transporter FeoB {ECO:0000313|EMBL:AJP73546.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ferrous iron transport protein B; K04759 ferrous iron transport protein B
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2938_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18280..18552)
|
iron transporter FeoA n=1 Tax=Sphingomonas elodea RepID=UPI00026319C8
Iron transporter FeoA {ECO:0000313|EMBL:AJP73547.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
feoA; Fe2+ transport system protein A; K04758 ferrous iron transport protein A
|
|
SCNpilot_expt_1000_bf_scaffold_2938_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18671..19330)
|
rpsU-divergently transcribed protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F51FE5
rbh
RpsU-divergently transcribed {ECO:0000313|EMBL:AJP73548.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative ubiquinone biosynthesis protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19327..20022)
|
permease n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCACF
DNA, contig: SP627 {ECO:0000313|EMBL:GAN13787.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_23
Pseudomonas rhizosphaerae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20312..22069
|
NADH:flavin oxidoreductase n=1 Tax=Sphingomonas elodea RepID=UPI00026319E2
rbh
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AIS17958.1}; TaxID=216142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas rhizosphaerae.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22272..23432)
|
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Sphingomonas elodea RepID=UPI00026319E5
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:AJP73553.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23419..24042)
|
ribE; riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9]
riboflavin synthase subunit alpha n=1 Tax=Sphingomonas elodea RepID=UPI00026319E6
rbh
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AJP73554.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24042..24968)
|
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Sphingomonas sp. S17 RepID=F3WYB1_9SPHN
rbh
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:AJP74673.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24983..25384)
|
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631D56
Uncharacterized protein {ECO:0000313|EMBL:AJP73555.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2938_28
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25398..25589)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000309D8C1
TonB-like protein {ECO:0000313|EMBL:KGB57560.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
TonB family protein
|
|
SCNpilot_expt_1000_bf_scaffold_2938_29
unknown
|
Not on your lists |
25742..25918
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2938_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26150..27475)
|
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glutamyl-tRNA ligase (EC:6.1.1.17)
rbh
glutamyl-tRNA synthetase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D82754
rbh
|