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SCNpilot_expt_1000_bf_scaffold_8989

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8989_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..473)
DNA (471bp) protein (157aa)
FAD-dependent oxidoreductase n=1 Tax=Sphingomonas elodea RepID=UPI0002630CCA
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AJP70932.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_8989_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(800..1744)
DNA (945bp) protein (315aa)
pldB; lysophospholipase (EC:3.1.1.5); K01048 lysophospholipase [EC:3.1.1.5]
alpha/beta hydrolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FD4EDF rbh
Lysophospholipase {ECO:0000313|EMBL:AJP70931.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_1000_bf_scaffold_8989_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1794..2267
DNA (474bp) protein (158aa)
cpaA; Flp pilus assembly protein protease; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
peptidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288A010
Peptidase {ECO:0000313|EMBL:AJP70930.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_1000_bf_scaffold_8989_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2329..3360
DNA (1032bp) protein (344aa)
pilus assembly protein CpaB n=1 Tax=Sphingomonas elodea RepID=UPI0002630CCD rbh
Pilus assembly protein CpaB {ECO:0000313|EMBL:AJP70929.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Flp pilus assembly protein CpaB rbh
SCNpilot_expt_1000_bf_scaffold_8989_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3362..4621
DNA (1260bp) protein (420aa)
secretion system protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630CCE
Flp pilus assembly protein CpaC {ECO:0000313|EMBL:GAO39653.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
type II secretion system protein; K02280 pilus assembly protein CpaC
Displaying 5 items

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