name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1356_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..385)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289E4F7
DNA, contig: SP659 {ECO:0000313|EMBL:GAN15524.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
alpha/beta hydrolase domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1356_2
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1132..2001
|
phenylalanine-4-hydroxylase n=1 Tax=Sphingomonas elodea RepID=UPI00026304FB
rbh
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:GAL99961.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2120..3094)
|
ribosomal L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J4V3_9SPHN
Ribonucleotide-diphosphate reductase subunit beta {ECO:0000313|EMBL:AJP73827.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_4
unknown
|
Not on your lists |
comp(3094..3801)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1356_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3791..4273)
|
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F76525
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AIT06818.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_expt_1000_bf_scaffold_1356_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4567..4860)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DB1FEA
Chemotaxis protein {ECO:0000313|EMBL:AJP73825.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
methyl-accepting chemotaxis sensory transducer
|
|
SCNpilot_expt_1000_bf_scaffold_1356_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5940..6233)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036457E8
Chemotaxis protein {ECO:0000313|EMBL:AJP73824.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
pilJ; twitching motility protein PilJ
|
|
SCNpilot_expt_1000_bf_scaffold_1356_8
unknown
|
Not on your lists |
6696..7409
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1356_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7493..7918
|
succinate dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI0002632213
Succinate dehydrogenase {ECO:0000313|EMBL:AJP73823.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
succinate dehydrogenase cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
|
|
SCNpilot_expt_1000_bf_scaffold_1356_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7911..8300
|
succinate dehydrogenase subunit D (EC:1.3.5.1); K00242 succinate dehydrogenase membrane anchor subunit
succinate dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA1B6
Succinate dehydrogenase {ECO:0000313|EMBL:AJP73822.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8300..10096
|
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B70820
rbh
Fumarate reductase {ECO:0000313|EMBL:AJP73821.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_12
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10166..10378)
|
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EGS5_9SPHN
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:EHJ59518.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
putative plasmid maintenance system antidote protein
|
|
SCNpilot_expt_1000_bf_scaffold_1356_13
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10478..11026
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVT8_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1356_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11140..12114
|
peptidase C13, legumain asparaginyl peptidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003644D9D
rbh
Peptidase C13 {ECO:0000313|EMBL:AJP73818.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1356_15
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12116..12979
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000367485E
Uncharacterized protein {ECO:0000313|EMBL:EZP48867.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1356_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13039..13824
|
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
succinate dehydrogenase iron-sulfur protein (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Sphingomonas elodea RepID=UPI00026302D8
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1356_17
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13892..14083)
|
Putative uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XT04_PSEMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP84470.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14214..14672
|
phenylacetic acid degradation protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002892D6A
Sphingomonas taxi strain 30a NODE_40, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30383.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phenylacetic acid degradation-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_1356_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14776..15243
|
AFG1 family ATPase n=1 Tax=Sphingomonas elodea RepID=UPI00026302DC
ATPase {ECO:0000313|EMBL:AJP73816.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
AFG1 family ATPase; K06916
|
|
SCNpilot_expt_1000_bf_scaffold_1356_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15191..15850
|
AFG1 family ATPase n=1 Tax=Sphingomonas elodea RepID=UPI00026302DC
ATPase {ECO:0000313|EMBL:AJP73816.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative ATPase; K06916
|
|
SCNpilot_expt_1000_bf_scaffold_1356_21
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15881..16657
|
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IU90_9SPHN
rbh
hypothetical protein
rbh
Hypothetical membrane protein {ECO:0000313|EMBL:BAK68615.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_22
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16659..18560
|
beta-glucuronidase n=1 Tax=Sphingomonas elodea RepID=UPI00026302DD
rbh
Putative glycosidase {ECO:0000313|EMBL:GAM01415.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_23
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18517..19026)
|
Transcriptional regulator, HxlR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQN3_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:AHE54990.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
HxlR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1356_24
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19088..19495
|
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZB8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE54989.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
SCNpilot_expt_1000_bf_scaffold_1356_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19500..20642)
|
glutathionylspermidine synthase n=1 Tax=Sphingomonas melonis RepID=UPI00037D0E48
rbh
Sphingomonas taxi strain 30a NODE_64, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26771.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20642..21004)
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDBBB
Uncharacterized protein {ECO:0000313|EMBL:KEZ21127.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_27
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21105..21434
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD530
hypothetical protein
UPF0145 protein S58_07570 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21440..21730
|
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3B5B3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO39730.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1356_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21891..22853
|
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
malate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B44570
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1356_30
unknown
|
Not on your lists |
23305..23523
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031333F5
|