name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1488_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..315
|
Putative ABC transporter permease protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKB3_9SPHN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative ABC transporter permease; K09686 antibiotic transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1488_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
321..1724
|
RND transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C8E
rbh
RND transporter {ECO:0000313|EMBL:AJP71747.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative outer membrane protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1750..3342)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
Signal transduction histidine kinase n=1 Tax=Caulobacter sp. AP07 RepID=J3A4X1_9CAUL
rbh
integral membrane sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_4
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3327..4043)
|
Two-component system response regulator n=2 Tax=Sphingobium RepID=D4Z7L8_SPHJU
rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:EQB02623.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
two-component system response regulator; K02483 two-component system, OmpR family, response regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_5
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4040..5647)
|
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B48A46
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL26067.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
cydD; ABC transporter ATP-binding protein CydD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5760..7049
|
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2X1_9SPHN
rbh
Molecular chaperone Hsp70 {ECO:0000313|EMBL:AIT07788.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
molecular chaperone-like protein; K04046 hypothetical chaperone protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
comp(7061..8122)
|
copper resistance protein CopD n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDAF6
Copper resistance protein CopD {ECO:0000313|EMBL:KIJ72440.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
copper resistance protein CopD
|
|
SCNpilot_expt_1000_bf_scaffold_1488_8
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8125..8493)
|
copper resistance protein C n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDAF7
Copper resistance protein C {ECO:0000313|EMBL:ETI65489.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
copper resistance protein CopC; K07156
|
|
SCNpilot_expt_1000_bf_scaffold_1488_9
unknown
|
Not on your lists |
8690..8956
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1488_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8953..9393
|
heavy metal resistance protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000364822B
Heavy metal resistance protein {ECO:0000313|EMBL:KEZ15189.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
heavy metal resistance protein
|
|
SCNpilot_expt_1000_bf_scaffold_1488_11
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9390..9956
|
FecI sigma-24 factor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287CF22
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
|
|
SCNpilot_expt_1000_bf_scaffold_1488_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10033..11937
|
UPI0003D5A74C related cluster n=1 Tax=unknown RepID=UPI0003D5A74C
Copper-binding protein {ECO:0000313|EMBL:ETI65494.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
copper resistance protein CopA
|
|
SCNpilot_expt_1000_bf_scaffold_1488_13
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11934..12920
|
copper resistance protein CopB n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B57DD0
Copper resistance protein CopB {ECO:0000313|EMBL:KFL46262.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
copper resistance protein CopB; K07233 copper resistance protein B
|
|
SCNpilot_expt_1000_bf_scaffold_1488_14
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12963..14192)
|
Fosmidomycin resistance protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IDF6_9SPHN
rbh
Fosmidomycin resistance protein {ECO:0000313|EMBL:EQB07664.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
major facilitator transporter; K08223 MFS transporter, FSR family, fosmidomycin resistance protein
|
|
SCNpilot_expt_1000_bf_scaffold_1488_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14264..15043
|
AraC family transcriptional regulator n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C004
rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KEZ18698.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
AraC family transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_16
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15135..16229
|
peptidase M19 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B43FAD
rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
|
|
SCNpilot_expt_1000_bf_scaffold_1488_17
unknown
|
Not on your lists |
16319..16582
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1488_18
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16699..17478)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037C5B27
rbh
methyltransferase
Methyltransferase {ECO:0000313|EMBL:ADG10138.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1488_19
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17607..18791
|
histidine kinase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6F037
rbh
Histidine kinase {ECO:0000313|EMBL:EQA96993.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
yesM; two-component system sensor histidine kinase YesM
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_20
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18781..19521
|
LytTR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488531
rbh
LytTR family two component transcriptional regulator
rbh
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:AGH49975.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1488_21
unknown
|
Not on your lists |
comp(19574..19924)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1488_22
unknown
|
Not on your lists |
19993..20178
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1488_23
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20210..22096
|
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000349C793
rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO91664.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
putative lipoprotein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22500..23045
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031805B1
Peptidylprolyl isomerase {ECO:0000313|EMBL:AJP73672.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1488_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23042..23374
|
cyclophilin type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WWP3_9SPHN
Peptidylprolyl isomerase {ECO:0000313|EMBL:AJP73672.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1488_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23423..24022)
|
ABC transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EE0529
Uncharacterized protein {ECO:0000313|EMBL:GAO38155.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ABC transporter auxiliary component-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_1488_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24031..24996)
|
mammalian cell entry protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FEE109
rbh
Mammalian cell entry protein {ECO:0000313|EMBL:AJP73331.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
mammalian cell entry domain-containing protein; K02067 putative ABC transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1488_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24996..25817)
|
iron ABC transporter ATP-binding protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630FFB
rbh
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJP73330.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1488_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25814..26890)
|
ABC transporter permease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000315D86D
rbh
ABC transporter permease {ECO:0000313|EMBL:AJP73329.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1488_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26952..27623
|
haloacid dehalogenase n=1 Tax=Sphingomonas elodea RepID=UPI0002630FF9
rbh
Haloacid dehalogenase {ECO:0000313|EMBL:AJP74631.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
HAD-superfamily hydrolase
|