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SCNpilot_expt_1000_bf_scaffold_10184

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10184_1
unknown

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comp(1..738)
DNA (738bp) protein (246aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10184_2
unknown

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1469..1603
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10184_3
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1618..1920
DNA (303bp) protein (101aa)
UPI0003D5E01A related cluster n=1 Tax=unknown RepID=UPI0003D5E01A
Ketohydroxyglutarate aldolase {ECO:0000313|EMBL:ETI63817.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10184_4
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1917..3386
DNA (1470bp) protein (490aa)
peptidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FFB7F5 rbh
Peptidase {ECO:0000313|EMBL:EQB12754.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_10184_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3383..3706
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CQR4_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU74469.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
SCNpilot_expt_1000_bf_scaffold_10184_6
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3703..4080)
DNA (378bp) protein (126aa)
signal transduction histidine kinase (EC:2.7.3.-)
regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630B21
PAS domain S-box {ECO:0000313|EMBL:EJK85043.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
SCNpilot_expt_1000_bf_scaffold_10184_7
unknown

Not on your lists

4583..4795
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10184_8
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5495..5806)
DNA (312bp) protein (104aa)
cheR; chemotaxis protein methyltransferase; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
Methylase of chemotaxis methyl-accepting protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D5R0_9SPHN
Methylase of chemotaxis methyl-accepting protein {ECO:0000313|EMBL:EJK85044.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
SCNpilot_expt_1000_bf_scaffold_10184_9
unknown

Not on your lists

6078..6431
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10184_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6289..9471)
DNA (3183bp) protein (1061aa)
chemotaxis protein CheY n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000374F6A7
Chemotaxis protein CheY {ECO:0000313|EMBL:EZP74045.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
putative two-component system hybrid sensor and regulator
SCNpilot_expt_1000_bf_scaffold_10184_11
unknown

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9925..10359
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying 11 items

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