name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3339_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..698)
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Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria;
gcvPA; glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2]
glycine dehydrogenase subunit 1 n=1 Tax=Sphingomonas elodea RepID=UPI0002630F9C
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SCNpilot_expt_1000_bf_scaffold_3339_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(823..1194)
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glycine cleavage system protein H n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DDF1A5
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
glycine cleavage system protein H; K02437 glycine cleavage system H protein
|
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SCNpilot_expt_1000_bf_scaffold_3339_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1194..2357)
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Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
rbh
aminomethyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031AD0D4
rbh
|
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SCNpilot_expt_1000_bf_scaffold_3339_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2644..2976)
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Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A129_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AHX15567.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
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SCNpilot_expt_1000_bf_scaffold_3339_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2973..3467)
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hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D42F65
Uncharacterized protein {ECO:0000313|EMBL:AJP74207.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
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SCNpilot_expt_1000_bf_scaffold_3339_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3710..4663
|
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D67E6D
rbh
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SCNpilot_expt_1000_bf_scaffold_3339_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4712..5719
|
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
homoserine kinase n=1 Tax=Sphingomonas elodea RepID=UPI0002630762
rbh
|
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SCNpilot_expt_1000_bf_scaffold_3339_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5719..6156
|
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
rnhA; ribonuclease H (EC:3.1.26.4)
RNaseH ribonuclease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031BA1A6
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SCNpilot_expt_1000_bf_scaffold_3339_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6183..6392)
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Beta-lactamase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T914_CAUSK
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABZ74401.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
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SCNpilot_expt_1000_bf_scaffold_3339_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6673..6888)
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Beta-lactamase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T914_CAUSK
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABZ74401.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
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SCNpilot_expt_1000_bf_scaffold_3339_11
unknown
|
Not on your lists |
7002..7475
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3339_12
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7364..9817)
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Glycoside hydrolase family 2 sugar binding protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCB3_9BURK
rbh
Glycoside hydrolase family 2 sugar binding protein {ECO:0000313|EMBL:ELX09252.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
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SCNpilot_expt_1000_bf_scaffold_3339_13
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9958..10656)
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Bacterial regulatory protein, tetR family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QIS9_9CAUL
Bacterial regulatory protein, tetR family protein {ECO:0000313|EMBL:EGF91838.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
transcriptional regulator, TetR family
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SCNpilot_expt_1000_bf_scaffold_3339_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10800..13010)
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TonB-denpendent receptor n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCEA0
Uncharacterized protein {ECO:0000313|EMBL:AIT05305.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
TonB-dependent receptor
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SCNpilot_expt_1000_bf_scaffold_3339_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13116..14756)
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AMP-dependent synthetase and ligase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0P5_9PROT
rbh
AMP-dependent synthetase {ECO:0000313|EMBL:AIT05306.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
AMP-dependent synthetase and ligase
rbh
|
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SCNpilot_expt_1000_bf_scaffold_3339_16
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15296..16387
|
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00035C486A
Poly(3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:KJV08841.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein; K03932 polyhydroxybutyrate depolymerase
|
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SCNpilot_expt_1000_bf_scaffold_3339_17
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16414..17643
|
Major facilitator superfamily MFS_1 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMZ1_BRESC
rbh
major facilitator superfamily protein
rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADL02147.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
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SCNpilot_expt_1000_bf_scaffold_3339_18
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17727..18680)
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esterase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCA71
rbh
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:KGB92234.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
putative hydrolase
rbh
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SCNpilot_expt_1000_bf_scaffold_3339_19
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18694..18918)
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short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6G0_CAUSK
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABZ69577.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
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