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SCNpilot_expt_1000_bf_scaffold_3355

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3355_1
unknown

Not on your lists

comp(2..217)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3355_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(465..1688)
DNA (1224bp) protein (408aa)
Beta-lactamase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4D5_9PROT
Beta-lactamase {ECO:0000313|EMBL:EGX99626.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
beta-lactamase
SCNpilot_expt_1000_bf_scaffold_3355_3
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1699..2847)
DNA (1149bp) protein (383aa)
Beta-lactamase n=1 Tax=Paenibacillus sp. P22 RepID=T2LV30_9BACL
Beta-lactamase {ECO:0000313|EMBL:CDN45597.1}; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
beta-lactamase
SCNpilot_expt_1000_bf_scaffold_3355_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2847..3428)
DNA (582bp) protein (194aa)
acetyltransferase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EDE5
Putative acetyltransferase {ECO:0000313|EMBL:GAO38765.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
N-acetyltransferase GCN5
SCNpilot_expt_1000_bf_scaffold_3355_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3398..4399)
DNA (1002bp) protein (334aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028A0F57 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP73002.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
polysaccharide deacetylase
SCNpilot_expt_1000_bf_scaffold_3355_6
unknown

Not on your lists

comp(4499..5161)
DNA (663bp) protein (221aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3355_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5184..5639)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQ53_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH13193.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
SCNpilot_expt_1000_bf_scaffold_3355_8
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5724..6107)
DNA (384bp) protein (128aa)
UPI0003CEE4A4 related cluster n=1 Tax=unknown RepID=UPI0003CEE4A4
Uncharacterized protein {ECO:0000313|EMBL:ESY86589.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3355_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6164..7501)
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
Signal transduction histidine kinase n=1 Tax=Rhizobium sp. CF142 RepID=J1SJ47_9RHIZ rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_3355_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7498..8127)
DNA (630bp) protein (210aa)
Two-component response regulator n=1 Tax=Roseovarius sp. TM1035 RepID=A6DXG8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AHE56727.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
two-component response regulator
SCNpilot_expt_1000_bf_scaffold_3355_11
unknown

Not on your lists

comp(8329..8628)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3355_12
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..9723)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z393_DESAF
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EGJ50337.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
SCNpilot_expt_1000_bf_scaffold_3355_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9906..10358)
DNA (453bp) protein (151aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HQE4_9BRAD
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:ERF86646.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
transcriptional regulator protein
Displaying 13 items

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