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SCNpilot_expt_1000_bf_scaffold_9207

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9207_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1309)
DNA (1308bp) protein (436aa)
aminopeptidase N n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000300C445
Aminopeptidase N {ECO:0000313|EMBL:AJP73092.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
pepN; aminopeptidase N
SCNpilot_expt_1000_bf_scaffold_9207_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1430..3118
DNA (1689bp) protein (563aa)
peptidase M28 n=1 Tax=Sphingomonas elodea RepID=UPI0002630DA4 rbh
Aminopeptidase {ECO:0000313|EMBL:AJP73091.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peptidase M28 rbh
SCNpilot_expt_1000_bf_scaffold_9207_3
unknown

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comp(3094..3231)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9207_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3867..4706
DNA (840bp) protein (280aa)
peptidase M28 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC96C
Peptidase M28 {ECO:0000313|EMBL:AJP73090.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative aminopeptidase
SCNpilot_expt_1000_bf_scaffold_9207_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4703..6337
DNA (1635bp) protein (545aa)
peptidase M28 n=1 Tax=Sphingomonas elodea RepID=UPI0002630DA3 rbh
Peptidase M28 {ECO:0000313|EMBL:AJP73090.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peptidase M28
SCNpilot_expt_1000_bf_scaffold_9207_6
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6456..7268
DNA (813bp) protein (271aa)
epimerase n=1 Tax=Sphingomonas elodea RepID=UPI0002630DA2 rbh
Putative NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:GAM01230.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_9207_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7178..7396)
DNA (219bp) protein (73aa)
multidrug transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003048D3B
Multidrug transporter {ECO:0000313|EMBL:AJP73088.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9207_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7378..8196)
DNA (819bp) protein (273aa)
multidrug transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003048D3B
Multidrug transporter {ECO:0000313|EMBL:AJP73088.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9207_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8263..9264)
DNA (1002bp) protein (334aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] rbh
amino acid lyase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030E7C22 rbh
Threonine aldolase {ECO:0000313|EMBL:AJP73087.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_1000_bf_scaffold_9207_10
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9355..10356)
DNA (1002bp) protein (334aa)
putative hydrolase n=1 Tax=Streptomyces acidiscabies RepID=UPI000289D88E
Uncharacterized protein {ECO:0000313|EMBL:ESQ85113.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
putative hydrolase
SCNpilot_expt_1000_bf_scaffold_9207_11
unknown

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comp(10409..10687)
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 11 items

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