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SCNpilot_expt_1000_bf_scaffold_4686

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4686_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..241
DNA (240bp) protein (80aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
carbonate dehydratase n=1 Tax=Sphingomonas elodea RepID=UPI0002631733
SCNpilot_expt_1000_bf_scaffold_4686_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(270..944)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382CE60
Ankyrin {ECO:0000313|EMBL:EEF57620.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_expt_1000_bf_scaffold_4686_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1001..1777)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631AB7 rbh
Polyphosphate kinase {ECO:0000313|EMBL:AJP71632.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_4686_4
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1880..2506
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003661820
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_expt_1000_bf_scaffold_4686_5
unknown

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comp(2520..3044)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4686_6
unknown

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comp(3504..4235)
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4686_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4502..5518)
DNA (1017bp) protein (339aa)
D-isomer specific 2-hydroxyacid dehydrogenase; K03778 D-lactate dehydrogenase [EC:1.1.1.28] rbh
D-lactate dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F58B07 rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ABZ70488.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_4686_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5643..7034)
DNA (1392bp) protein (464aa)
L-serine dehydratase 1 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S210_9SPHN
L-serine dehydratase 1
L-serine dehydratase 1 {ECO:0000313|EMBL:AGH50035.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_expt_1000_bf_scaffold_4686_9
unknown

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comp(7118..7825)
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4686_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7832..9670)
DNA (1839bp) protein (613aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] rbh
aspartyl-tRNA synthetase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035D515A rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying 10 items

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