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SCNpilot_expt_1000_bf_scaffold_6344

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6344_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1037
DNA (1035bp) protein (345aa)
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9776
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJP71902.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
acyl-CoA dehydrogenase
SCNpilot_expt_1000_bf_scaffold_6344_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1141..2226
DNA (1086bp) protein (362aa)
zinc-binding alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
alcohol dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI0002630AC5 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AJP71901.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_1000_bf_scaffold_6344_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2223..3239
DNA (1017bp) protein (339aa)
aminoglycoside phosphotransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630AC4 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AJP71900.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
aminoglycoside phosphotransferase; K06979 rbh
SCNpilot_expt_1000_bf_scaffold_6344_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3308..4075
DNA (768bp) protein (256aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.-) rbh
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381E72D rbh
Sphingomonas taxi strain 30a NODE_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29140.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_1000_bf_scaffold_6344_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4108..4893
DNA (786bp) protein (262aa)
oxidoreductase n=1 Tax=Sphingomonas elodea RepID=UPI0002630AC3 rbh
Oxidoreductase {ECO:0000313|EMBL:AJP71899.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_6344_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4948..5238
DNA (291bp) protein (97aa)
TonB-denpendent receptor n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DE95
Uncharacterized protein {ECO:0000313|EMBL:GAO55386.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_expt_1000_bf_scaffold_6344_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5199..5633
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2H158_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:AJP74388.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6344_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5630..6205)
DNA (576bp) protein (192aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRH7_9RHIZ
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:EIM26569.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phenazine antibiotic biosynthesis related protein; K06998
Displaying 8 items

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