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SCNpilot_expt_1000_bf_scaffold_31630

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_31630_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..649)
DNA (648bp) protein (216aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037E489E
SCNpilot_expt_1000_bf_scaffold_31630_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(646..1578)
DNA (933bp) protein (311aa)
glutamine--fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI0003681872 rbh
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:AIT08036.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_1000_bf_scaffold_31630_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1749..2477)
DNA (729bp) protein (243aa)
GntR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC0E5
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28742.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_31630_4
unknown

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comp(2887..3228)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_31630_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3953..4297
DNA (345bp) protein (115aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas elodea RepID=UPI0002630DDC
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor {ECO:0000313|EMBL:CCW19247.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
TonB-dependent receptor
Displaying 5 items

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