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SCNpilot_expt_1000_bf_scaffold_4586_7

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 4299..4898

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J2J4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 204.0
  • Bit_score: 149
  • Evalue 3.40e-33
Uncharacterized protein {ECO:0000313|EMBL:EQB18320.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 204.0
  • Bit_score: 149
  • Evalue 4.70e-33
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 161.0
  • Bit_score: 120
  • Evalue 6.90e-25

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Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGACCCTGCGTGTCGCCTGTACCGTCGAACTCCCTGACCTTGCCCGAGCCACTGCGGCGCGCGGACTGGGGCTCGTCCCCTATGCACCGGGGGTGGAGGCGGCGGCGGGCCTGTTCGCAGGCACGGGCGAGAGCGTGGCGCGGATCCGGGCACTGGGTTGGCAGGAGCCGCTCCTCCTGCTCCTGCCGATCGAGGGCAGCGTGGCGCAGGCGCTCGATGCCGGTGCCGACGATGCGATGCCCGCTTCCGCCACTGCCGAGGAAGTGGCGGCCCGCCTTGCCGCGCGGATCCGGCGGCGGCCCGAAATCGTGCTCGGCGAGCTTCGCATCGATCCCGTCGAGCGCCGGGTGACGCGCGCCGGCCGGCCGATATCGCTGCTGCCCCGCGAATATGCGCTGCTGCTTCACCTGGTCCGCCAGGGCGATCGACCGGCGGGGCGCTCCGAATTGCTGGCGGCGGTCTGGGGCCTCGACTTCGATCCCGGCACCAATGTCGTCGAGGTGCATGTCTCGCGGCTGCGCGCCAAGCTCGACCGGGGGTTCGCCATGCCGATGCTGCGCACCGACAAGGGACGCGGCTACCGGCTTTGCGTGGGCTGA
PROTEIN sequence
Length: 200
VTLRVACTVELPDLARATAARGLGLVPYAPGVEAAAGLFAGTGESVARIRALGWQEPLLLLLPIEGSVAQALDAGADDAMPASATAEEVAARLAARIRRRPEIVLGELRIDPVERRVTRAGRPISLLPREYALLLHLVRQGDRPAGRSELLAAVWGLDFDPGTNVVEVHVSRLRAKLDRGFAMPMLRTDKGRGYRLCVG*