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SCNpilot_expt_1000_bf_scaffold_4586

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4586_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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102..1340
DNA (1239bp) protein (413aa)
glucose sorbosone dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D76DC0 rbh
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:ENZ83370.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
glucose sorbosone dehydrogenase
SCNpilot_expt_1000_bf_scaffold_4586_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1337..1711)
DNA (375bp) protein (125aa)
phenylacetic acid degradation protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630317
Phenylacetic acid degradation protein {ECO:0000313|EMBL:AJP73299.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phenylacetic acid degradation-like protein
SCNpilot_expt_1000_bf_scaffold_4586_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1708..2148)
DNA (441bp) protein (147aa)
phenylacetic acid degradation protein n=1 Tax=Sphingomonas RepID=UPI0002899D16
Phenylacetic acid degradation protein {ECO:0000313|EMBL:AJP73300.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
phenylacetic acid degradation-like protein
SCNpilot_expt_1000_bf_scaffold_4586_4
unknown

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2272..2433
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4586_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2430..3383
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4C6
Uncharacterized protein {ECO:0000313|EMBL:AHE56666.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4586_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3371..4249
DNA (879bp) protein (293aa)
isxal2 transposase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4C7 rbh
Putative ISXo8 transposase {ECO:0000313|EMBL:CCW16900.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
putative transposase
SCNpilot_expt_1000_bf_scaffold_4586_7
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4299..4898
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J2J4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB18320.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_expt_1000_bf_scaffold_4586_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4938..5714
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJP73309.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AJP73309.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
enoyl-CoA hydratase (EC:4.2.1.17) rbh
enoyl-CoA hydratase n=1 Tax=Sphingomonas elodea RepID=UPI0002630315 rbh
SCNpilot_expt_1000_bf_scaffold_4586_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5704..6072)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UIT8_SINMW
Uncharacterized protein {ECO:0000313|EMBL:KDP71787.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4586_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6170..6544
DNA (375bp) protein (125aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F0185B
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AJP73308.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 10 items

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