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SCNpilot_expt_1000_bf_scaffold_14070

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14070_1
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..630)
DNA (630bp) protein (210aa)
Sulfatase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWE6_PARL1
Sulfatase {ECO:0000313|EMBL:GAK46073.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
sulfatase
SCNpilot_expt_1000_bf_scaffold_14070_2

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comp(711..941)
DNA (231bp) protein (77aa)
Plasmid maintenance system antidote protein, XRE family (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CKA8_9ZZZZ
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:EQD68490.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
virulence-associated protein
SCNpilot_expt_1000_bf_scaffold_14070_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1361..1864)
DNA (504bp) protein (168aa)
Nitroreductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFT8_XANP2
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ABS66881.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_14070_4
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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2167..2595
DNA (429bp) protein (143aa)
serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine O-acetyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIU3_9PROT
Serine O-acetyltransferase {ECO:0000313|EMBL:GAK46071.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_expt_1000_bf_scaffold_14070_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2577..2939
DNA (363bp) protein (121aa)
serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine O-acetyltransferase {ECO:0000313|EMBL:ABS64232.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ABS64232.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Serine O-acetyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWE9_PARL1
SCNpilot_expt_1000_bf_scaffold_14070_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3036..3266
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWF3_PARL1
Conserved protein {ECO:0000313|EMBL:GAK46062.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14070_7
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3288..4067)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWF4_PARL1
Conserved protein {ECO:0000313|EMBL:GAK46061.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14070_8
unknown

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4276..4569
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14070_9
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4604..5365)
DNA (762bp) protein (254aa)
PhoH family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VII9_CAUST rbh
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
PhoH family protein {ECO:0000313|EMBL:ADG09563.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_expt_1000_bf_scaffold_14070_10

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5641..6174
DNA (534bp) protein (178aa)
acetyltransferase n=1 Tax=Methylocystis parvus RepID=UPI0002D3F4DE
Uncharacterized protein {ECO:0000313|EMBL:KKN91526.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_14070_11
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6178..6741)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B73C22
Uncharacterized protein {ECO:0000313|EMBL:CDO58407.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14070_12
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6859..7644
DNA (786bp) protein (262aa)
enoyl-CoA hydratase; K08299 carnitinyl-CoA dehydratase [EC:4.2.1.-] rbh
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWG5_PARL1 rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_expt_1000_bf_scaffold_14070_13
unknown

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comp(7780..8010)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 13 items

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