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SCNpilot_expt_1000_bf_scaffold_6321

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6321_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..496)
DNA (495bp) protein (165aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
sulfate ABC transporter ATPase; K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
ABC transporter n=1 Tax=Dyella japonica RepID=UPI0002E47D40
SCNpilot_expt_1000_bf_scaffold_6321_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(507..1262)
DNA (756bp) protein (252aa)
Sulfate ABC transporter, permease protein CysW n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IY35_RHOCS
Sulfate ABC transporter permease {ECO:0000313|EMBL:KJB96266.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
cysW; sulfate ABC transporter permease CysW; K02047 sulfate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_6321_3
unknown

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comp(1250..1348)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6321_4
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1359..2204)
DNA (846bp) protein (282aa)
Sulfate transport system permease protein n=2 Tax=Bordetella bronchiseptica RepID=K0MUR8_BORBM
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:KCB36568.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
cysU; sulfate transport system permease
SCNpilot_expt_1000_bf_scaffold_6321_5
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2207..3217)
DNA (1011bp) protein (337aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T126_CAUSK
Sulfate ABC transporter, sulfate-binding family protein {ECO:0000313|EMBL:AJZ57948.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
sulfate ABC transporter periplasmic sulfate-binding protein; K02048 sulfate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_6321_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3259..4722)
DNA (1464bp) protein (488aa)
Polyphosphate-selective porin O n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R7Y1_PHEZH rbh
oprO; polyphosphate-selective porin O; K07221 phosphate-selective porin OprO and OprP rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_expt_1000_bf_scaffold_6321_7
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4906..5358)
DNA (453bp) protein (151aa)
Rrf2 family transcriptional regulator n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000371E3BB
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ADG09575.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_expt_1000_bf_scaffold_6321_8
R_WWE3_53_10, WWE3, Bacteria

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5568..6353
DNA (786bp) protein (262aa)
spnH; o-methyltransferase id=14424051 bin=bin11_novelCP species=Photorhabdus asymbiotica genus=Photorhabdus taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin11_novelCP organism_group=Unknown_CP
spnH; o-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_WWE3_53_10_curated
SCNpilot_expt_1000_bf_scaffold_6321_9
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6398..7294)
DNA (897bp) protein (299aa)
AcrB protein n=1 Tax=Aeromonas molluscorum 848 RepID=R1HAU8_9GAMM
acrB; multidrug efflux transporter, AcrB component
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Displaying 9 items

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