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SCNpilot_expt_1000_bf_scaffold_6542

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6542_1
unknown

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comp(3..116)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6542_2
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(579..1007)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W5V9_9CAUL
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_expt_1000_bf_scaffold_6542_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1060..2040)
DNA (981bp) protein (327aa)
thiamine-monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] rbh
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Thiamine-monophosphate kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX89_PARL1 rbh
SCNpilot_expt_1000_bf_scaffold_6542_4
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2155..2664)
DNA (510bp) protein (170aa)
N utilization substance protein B homolog n=1 Tax=Maricaulis maris (strain MCS10) RepID=NUSB_MARMM
nusB; transcription antitermination protein NusB; K03625 N utilization substance protein B
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
SCNpilot_expt_1000_bf_scaffold_6542_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2661..3107)
DNA (447bp) protein (149aa)
ribH; riboflavin synthase subunit beta; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I235_9RHIZ
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_expt_1000_bf_scaffold_6542_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3110..4234)
DNA (1125bp) protein (375aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX86_PARL1 rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:ABS64519.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_6542_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4231..4824)
DNA (594bp) protein (198aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ACI98743.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ACI98743.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Riboflavin synthase, alpha subunit n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMS7_RHOCS
SCNpilot_expt_1000_bf_scaffold_6542_8
unknown

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comp(4952..5077)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 8 items

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