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SCNpilot_expt_1000_bf_scaffold_6547

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6547_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..362)
DNA (360bp) protein (120aa)
Putative dinucleotide-binding enzyme n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BGM2_RHILV
Uncharacterized protein {ECO:0000313|EMBL:KGJ69538.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
NADP oxidoreductase, coenzyme F420-dependent; K06988
SCNpilot_expt_1000_bf_scaffold_6547_2

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comp(391..672)
DNA (282bp) protein (94aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003827A36
Short chain dehydrogenase {ECO:0000313|EMBL:AGU10219.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_6547_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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769..1584
DNA (816bp) protein (272aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32]
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:ABE64643.1}; EC=3.5.1.32 {ECO:0000313|EMBL:ABE64643.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Peptidase M20D, amidohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK4_NITHX
SCNpilot_expt_1000_bf_scaffold_6547_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1647..1952
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64644.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_6547_5
bacterium YEK0313, Bacteria

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comp(2074..3687)
DNA (1614bp) protein (538aa)
glutamate synthase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00036E2298 rbh
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:CEJ13844.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6547_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3781..3969)
DNA (189bp) protein (63aa)
RND-family efflux transporter n=2 Tax=Sphingobium RepID=D4Z8P4_SPHJU
cusC; RND-family efflux transporter
RND-family efflux transporter {ECO:0000313|EMBL:BAI98976.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_expt_1000_bf_scaffold_6547_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4127..5011)
DNA (885bp) protein (295aa)
RNA polymerase sigma 70 n=2 Tax=Saccharopolyspora erythraea RepID=T2S5P7_SACER
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CAM01245.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Displaying 7 items

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