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SCNpilot_expt_1000_bf_scaffold_8590

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8590_1
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..388)
DNA (387bp) protein (129aa)
Substrate-specific component PdxU2 of predicted pyridoxin-related protein ECF transporter n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RR42_9RHOB
Substrate-specific component PdxU2 of predicted pyridoxin-related protein ECF transporter {ECO:0000313|EMBL:EPX76459.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
signal transduction histidine kinase, LytS
SCNpilot_expt_1000_bf_scaffold_8590_2
unknown

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comp(390..986)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8590_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1150..2079
DNA (930bp) protein (310aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2DW07_9RHIZ
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAJ93525.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
transcriptional regulator protein
SCNpilot_expt_1000_bf_scaffold_8590_4
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2257..2805)
DNA (549bp) protein (183aa)
Response regulator receiver protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQM9_METSB
response regulator receiver protein; K15012 two-component system, response regulator RegA
Response regulator receiver protein {ECO:0000313|EMBL:ACK49300.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_expt_1000_bf_scaffold_8590_5
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2894..4129)
DNA (1236bp) protein (412aa)
integral membrane sensor signal transduction histidine kinase; K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036EB968 rbh
SCNpilot_expt_1000_bf_scaffold_8590_6
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4378..5646
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036794B2 rbh
polyhydroxyalkanoate depolymerase, intracellular rbh
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:CCJ08438.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_8590_7
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5760..6479
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QID0_METSZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ08356.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_8590_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6562..7107)
DNA (546bp) protein (182aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FF1FDC
SCNpilot_expt_1000_bf_scaffold_8590_9
unknown

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comp(7064..7246)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8590_10
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7364..8533)
DNA (1170bp) protein (390aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
S-adenosylmethionine synthase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QNR5_METTR rbh
Displaying 10 items

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