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SCNpilot_expt_1000_bf_scaffold_10290

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10290_1
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1340
DNA (1338bp) protein (446aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000368F0BA
SCNpilot_expt_1000_bf_scaffold_10290_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1408..1812)
DNA (405bp) protein (135aa)
MAPEG family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XKM7_VARPD
MAPEG family protein
MAPEG family protein {ECO:0000313|EMBL:AGU53133.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_1000_bf_scaffold_10290_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1827..2567)
DNA (741bp) protein (247aa)
short-chain dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI000368783D rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KEA03996.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
3-oxoacyl-ACP reductase rbh
SCNpilot_expt_1000_bf_scaffold_10290_4
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2609..2998)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DLJ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK83817.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10290_5
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3128..3487
DNA (360bp) protein (120aa)
transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003648AB0
Uncharacterized protein {ECO:0000313|EMBL:EJZ18920.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10290_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4030..5793
DNA (1764bp) protein (588aa)
General substrate transporter n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213Z7_RHOPB
general substrate transporter
General substrate transporter {ECO:0000313|EMBL:ABD88289.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_1000_bf_scaffold_10290_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5783..6346)
DNA (564bp) protein (188aa)
FAD-dependent oxidoreductase n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00031F7AEA
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KJC47087.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
oxygenase (tetracycline 6-hydroxylase) protein
Displaying 7 items

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