ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9143

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9143_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..326)
DNA (324bp) protein (108aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000255|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000255|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000255|HAMAP-Rule:MF_00113}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=QUEA_MESSB
SCNpilot_expt_1000_bf_scaffold_9143_2
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(404..859)
DNA (456bp) protein (152aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIV0_METSB
SCNpilot_expt_1000_bf_scaffold_9143_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(878..1489)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003740EA7
Uncharacterized protein {ECO:0000313|EMBL:EIM25317.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9143_4
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1527..2096)
DNA (570bp) protein (190aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IK25_METNO
PpiB protein {ECO:0000313|EMBL:BAQ45691.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_expt_1000_bf_scaffold_9143_5
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2135..2635)
DNA (501bp) protein (167aa)
coaD; phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G7C5_9BRAD
SCNpilot_expt_1000_bf_scaffold_9143_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2673..3389
DNA (717bp) protein (239aa)
Ankyrin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRA8_9BURK
Ankyrin repeat protein {ECO:0000313|EMBL:KFC75651.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ankyrin; K06867
SCNpilot_expt_1000_bf_scaffold_9143_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..3952)
DNA (567bp) protein (189aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSK2_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:KGM30939.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
HAD-superfamily hydrolase
Displaying 7 items

View Taxonomy