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SCNpilot_expt_1000_bf_scaffold_9375

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9375_1
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(167..1333)
DNA (1167bp) protein (389aa)
UPI0003CF462C related cluster n=1 Tax=unknown RepID=UPI0003CF462C
Hemolysin D {ECO:0000313|EMBL:ESX73265.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
RND family efflux transporter, MFP subunit
SCNpilot_expt_1000_bf_scaffold_9375_2
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1348..3807)
DNA (2460bp) protein (820aa)
UPI0003CF5935 related cluster n=1 Tax=unknown RepID=UPI0003CF5935
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Transporter {ECO:0000313|EMBL:ESY86630.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_expt_1000_bf_scaffold_9375_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4944..5588
DNA (645bp) protein (215aa)
UPI0003D06877 related cluster n=1 Tax=unknown RepID=UPI0003D06877
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM34259.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_9375_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5671..5985
DNA (315bp) protein (105aa)
Putative transmembrane protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRQ4_STEMA
Membrane protein {ECO:0000313|EMBL:AKC87373.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Putative transmembrane protein
SCNpilot_expt_1000_bf_scaffold_9375_5
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6017..6571
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P5W9_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EFG78523.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9375_6
bacterium YEK0313, Bacteria

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6899..7240
DNA (342bp) protein (114aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003674521
Uncharacterized protein {ECO:0000313|EMBL:CEJ11118.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9375_7
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7969..8964)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2IXS9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGE02083.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9375_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9075..9545
DNA (471bp) protein (157aa)
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79); K01720 2-methylcitrate dehydratase [EC:4.2.1.79]
Putative MmgE/PrpD n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1J7_9RHIZ
Putative MmgE/PrpD {ECO:0000313|EMBL:CCV11237.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Displaying 8 items

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