ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9470

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9470_1
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..251
DNA (249bp) protein (83aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000362CF80
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769, ECO:0000313|EMBL:CCJ05922.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_9470_2
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

577..861
DNA (285bp) protein (95aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QPT3_METSZ
SCNpilot_expt_1000_bf_scaffold_9470_3
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

858..1322
DNA (465bp) protein (155aa)
N utilization substance protein B homolog n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ICH4_BEII9
NusB antitermination factor; K03625 N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_expt_1000_bf_scaffold_9470_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1362..2363
DNA (1002bp) protein (334aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16]
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Thiamine-monophosphate kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPI5_METNO
SCNpilot_expt_1000_bf_scaffold_9470_5
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2360..2830)
DNA (471bp) protein (157aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSD4_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:ESW68189.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
transcriptional regulator AsnC-type-like protein
SCNpilot_expt_1000_bf_scaffold_9470_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2953..4065
DNA (1113bp) protein (371aa)
4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSD5_9RHIZ
Hemolysin VllY {ECO:0000313|EMBL:CDX24850.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_expt_1000_bf_scaffold_9470_7
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4069..4359)
DNA (291bp) protein (97aa)
chorismate mutase n=1 Tax=Gluconobacter frateurii RepID=UPI00029B4A05
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:AFW03060.1}; TaxID=1224746 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans H24.;"
Displaying 7 items

View Taxonomy