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SCNpilot_expt_1000_bf_scaffold_9832

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9832_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(451..1065)
DNA (615bp) protein (205aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQI5_9RHIZ
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:EIM26227.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
porin
SCNpilot_expt_1000_bf_scaffold_9832_2
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1332..2249)
DNA (918bp) protein (306aa)
Porin n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ITE4_METNO
porin
Porin {ECO:0000313|EMBL:ACL57030.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_9832_3
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2360..3109)
DNA (750bp) protein (250aa)
glyoxalase n=1 Tax=Burkholderia kururiensis RepID=UPI000348861E
Glyoxalase-like domain protein {ECO:0000313|EMBL:AJZ58939.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_1000_bf_scaffold_9832_4
unknown

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comp(3106..3285)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9832_5
unknown

Not on your lists

comp(3663..4334)
DNA (672bp) protein (224aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9832_6
unknown

Not on your lists

4372..5043
DNA (672bp) protein (224aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9832_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5066..5776)
DNA (711bp) protein (237aa)
hydrolase n=1 Tax=Xanthomonas arboricola RepID=UPI0002E2F185
Hydrolase {ECO:0000313|EMBL:AKC80977.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hydrolase
SCNpilot_expt_1000_bf_scaffold_9832_8
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5869..6750)
DNA (882bp) protein (294aa)
Alpha/beta hydrolase fold n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGY9_METS4
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ACA16858.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_9832_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6845..7852
DNA (1008bp) protein (336aa)
alcohol dehydrogenase (EC:1.1.1.1) rbh
Alcohol dehydrogenase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW06_GRABC rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_1000_bf_scaffold_9832_10
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7897..9129
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036B8261
glycosyltransferase
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:CCJ06670.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_9832_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9139..10074)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYG9_PARL1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABS64952.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_9832_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10228..11160
DNA (933bp) protein (311aa)
2-keto-4-pentenoate hydratase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4T5_9BURK rbh
2-keto-4-pentenoate hydratase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_expt_1000_bf_scaffold_9832_13
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11377..12339)
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
NAD-dependent epimerase/dehydratase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9R2_METS4
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACA19007.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_9832_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12425..12694)
DNA (270bp) protein (90aa)
Lipopolysaccharide-modifying protein {ECO:0000313|EMBL:KKB83975.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_expt_1000_bf_scaffold_9832_15
unknown

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comp(12681..13472)
DNA (792bp) protein (264aa)

This feature has no annotations

Displaying 15 items

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