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SCNpilot_expt_1000_bf_scaffold_9885

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9885_1
unknown

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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370..1227
DNA (858bp) protein (286aa)
ParB-like nuclease n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I0V1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KGT75917.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
ParB domain-containing protein nuclease
SCNpilot_expt_1000_bf_scaffold_9885_3
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1224..1910
DNA (687bp) protein (229aa)
RNA polymerase sigma factor n=3 Tax=Agrobacterium RepID=F0LEI2_AGRSH
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_9885_4
R_Chlamydiae_49_9, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2149..2652
DNA (504bp) protein (168aa)
tryptophanyl-tRNA ligase II (EC:6.1.1.2)
Tryptophan-tRNA ligase n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3I0A2_ENTCL
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_9_curated
SCNpilot_expt_1000_bf_scaffold_9885_5
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2649..3182
DNA (534bp) protein (178aa)
trpS2; tryptophanyl-tRNA synthetase II (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophanyl-tRNA synthetase n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CB10_9BURK
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:EJN02044.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
SCNpilot_expt_1000_bf_scaffold_9885_6
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(3189..3911)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI0003619862
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF27552.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_expt_1000_bf_scaffold_9885_7
unknown

Not on your lists

4013..4666
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_8
unknown

Not on your lists

4663..4902
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_9
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5119..5418
DNA (300bp) protein (100aa)
Histone family protein DNA-binding protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4V8_HYPSM
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Histone family protein DNA-binding protein {ECO:0000313|EMBL:CCB63279.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_9885_10
unknown

Not on your lists

5523..5720
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_11
unknown

Not on your lists

5720..6010
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_12
unknown

Not on your lists

6058..6420
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_13
unknown

Not on your lists

7352..7870
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_14
unknown

Not on your lists

7880..8116
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_15
unknown

Not on your lists

8343..8807
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_16
unknown

Not on your lists

8807..9106
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_17
unknown

Not on your lists

9103..9456
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_18
unknown

Not on your lists

9473..9742
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_19
unknown

Not on your lists

9745..10704
DNA (960bp) protein (320aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9885_20
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10708..12504)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N416_9FIRM
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_expt_1000_bf_scaffold_9885_21
unknown

Not on your lists

12691..13002
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 21 items

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