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SCNpilot_expt_1000_bf_scaffold_5666

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5666_1
unknown

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1..333
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5666_2
unknown

Not on your lists

615..1028
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5666_3
bacterium YEK0313, Bacteria

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comp(1080..1814)
DNA (735bp) protein (245aa)
SoxAX cytochrome complex subunit A {ECO:0000256|PIRNR:PIRNR038455}; EC=1.8.2.- {ECO:0000256|PIRNR:PIRNR038455};; Protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Sulfur oxidizing protein A {ECO:0000256|PIRNR:PIRNR038455}; Thiosulfate-oxidizing multienzyme system protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SoxAX cytochrome complex subunit A n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M21_RHOP5
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5666_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2014..2478
DNA (465bp) protein (155aa)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJR6_9BRAD
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS41781.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
sulfur oxidation protein SoxY
SCNpilot_expt_1000_bf_scaffold_5666_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2501..2827
DNA (327bp) protein (109aa)
Sulfur oxidation protein SoxZ n=2 Tax=Bradyrhizobiaceae RepID=F7QKM1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42556.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
sulfur oxidation protein SoxZ
SCNpilot_expt_1000_bf_scaffold_5666_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2915..4612
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTW6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41783.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
twin-arginine translocation pathway signal
SCNpilot_expt_1000_bf_scaffold_5666_7
bacterium YEK0313, Bacteria

Not on your lists

4789..5916
DNA (1128bp) protein (376aa)
Oxidoreductase molybdopterin binding n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFH3_XANP2
Sulfoxide reductase catalytic subunit YedY {ECO:0000313|EMBL:CEJ12775.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
molybdopterin binding oxidoreductase
SCNpilot_expt_1000_bf_scaffold_5666_8
bacterium YEK0313, Bacteria

Not on your lists

5900..6577
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQJ3_9BRAD
Cytochrome c {ECO:0000313|EMBL:CEJ12774.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
sulfite oxidase cytochrome subunit SoxD
SCNpilot_expt_1000_bf_scaffold_5666_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6607..6909
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030D3BFA
Putative cytochrome subunit of sulfide dehydrogenase {ECO:0000313|EMBL:KFC66564.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5666_10
bacterium YEK0313, Bacteria

Not on your lists

6931..8202
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PIS7_9BRAD rbh
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain {ECO:0000313|EMBL:CEJ12771.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
flavin-binding flavocytochrome c sulfide dehydrogenase rbh
SCNpilot_expt_1000_bf_scaffold_5666_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8341..8733
DNA (393bp) protein (131aa)
Cytochrome c2 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLZ7_9BRAD
Cytochrome C {ECO:0000313|EMBL:KFG67174.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
cytochrome C; K08738 cytochrome c
SCNpilot_expt_1000_bf_scaffold_5666_12
unknown

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8739..9068
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5666_13
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8930..10441)
DNA (1512bp) protein (504aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4) rbh
Glutamate dehydrogenase n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4INH4_RHIML rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
SCNpilot_expt_1000_bf_scaffold_5666_14
bacterium YEK0313, Bacteria

Not on your lists

comp(10659..11648)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003153550 rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ10602.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5666_15
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..12618
DNA (738bp) protein (246aa)
Transcriptional regulator, IclR family n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GNK3_9PROT
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EKV26642.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
IclR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5666_16
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12822..13730
DNA (909bp) protein (303aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Putative carboxymethylenebutenolidase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C280_9PLAN rbh
Dienelactone hydrolase {ECO:0000313|EMBL:KAJ55305.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
SCNpilot_expt_1000_bf_scaffold_5666_17
unknown

Not on your lists

comp(13910..14365)
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5666_18
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14857..15210)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003802904
Uncharacterized protein {ECO:0000313|EMBL:ELT49314.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
Displaying 18 items

View Taxonomy