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SCNpilot_expt_1000_bf_scaffold_5712

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5712_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..407)
DNA (405bp) protein (135aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Aldehyde dehydrogenase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S887_9PLAN
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_expt_1000_bf_scaffold_5712_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(445..1311)
DNA (867bp) protein (289aa)
Membrane protein involved in colicin uptake n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HH48_BURVI
Uncharacterized protein {ECO:0000313|EMBL:AJZ63683.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5712_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1788..2315)
DNA (528bp) protein (176aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ93_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM26135.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
transcriptional regulator TrmB
SCNpilot_expt_1000_bf_scaffold_5712_4
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2403..3620)
DNA (1218bp) protein (406aa)
Major facilitator transporter n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VD75_9PSED
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDH43279.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
major facilitator transporter
SCNpilot_expt_1000_bf_scaffold_5712_5
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3637..4662)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYX2_9ALTE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_expt_1000_bf_scaffold_5712_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4682..5668)
DNA (987bp) protein (329aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] rbh
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13R11_BURXL rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
SCNpilot_expt_1000_bf_scaffold_5712_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5841..7241)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036E3856 rbh
peptidoglycan binding domain-containing protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ACA14970.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_5712_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7473..12698
DNA (5226bp) protein (1742aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036157E6 rbh
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:KFC65086.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alpha-2-macroglobulin domain-containing protein; K06894
SCNpilot_expt_1000_bf_scaffold_5712_9
unknown

Not on your lists

comp(12830..13042)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5712_10
unknown

Not on your lists

comp(13283..13672)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5712_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14833..16902)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CU87_9RHIZ rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_expt_1000_bf_scaffold_5712_12
unknown

Not on your lists

comp(16998..17363)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5712_13
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17572..18246)
DNA (675bp) protein (225aa)
Major facilitator superfamily MFS_1 n=2 Tax=Saccharopolyspora erythraea RepID=A4FHT4_SACEN
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:EQD81651.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
Displaying 13 items

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