ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5771

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5771_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1070)
DNA (1068bp) protein (356aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
Potassium-transporting ATPase A chain n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13DD9_RHOPS
SCNpilot_expt_1000_bf_scaffold_5771_2
unknown

Not on your lists

1215..1463
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5771_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2009..2281
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FC6A
Uncharacterized protein {ECO:0000313|EMBL:EKY30389.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5771_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2394..3371
DNA (978bp) protein (326aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B8F32
dihydrodipicolinate synthase rbh
SCNpilot_expt_1000_bf_scaffold_5771_5
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3322..4092)
DNA (771bp) protein (257aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESF6_METSB
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ACK49846.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_expt_1000_bf_scaffold_5771_6
unknown

Not on your lists

4341..4526
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5771_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4571..4804
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2JKZ8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN52697.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5771_8

Not on your lists

5193..5552
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003632DC0
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48899.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 8 items

View Taxonomy