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SCNpilot_expt_1000_bf_scaffold_5832

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5832_1
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QN89_METSZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ06798.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_5832_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

376..852
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000372828E
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KKB84351.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
BadM/Rrf2 family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5832_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

993..2054
DNA (1062bp) protein (354aa)
sulfate adenylyltransferase large subunit (EC:2.7.7.4); K00956 sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
sulfate transporter subunit n=1 Tax=Methyloferula stellata RepID=UPI00037879AE rbh
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:KFC61558.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_5832_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2051..2899
DNA (849bp) protein (283aa)
Sulfate ABC transporter, inner membrane subunit CysT n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F3D3_9RHIZ
Sulfate ABC transporter, inner membrane subunit CysT {ECO:0000313|EMBL:KFC61557.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative permease component of ABC transporter; K02046 sulfate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_5832_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2892..3764
DNA (873bp) protein (291aa)
sulfate ABC transporter permease n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000302C76F
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:KFC61556.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfate ABC transporter permease; K02047 sulfate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_5832_6
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4301..4516)
DNA (216bp) protein (72aa)
Phenol hydroxylase n=1 Tax=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) RepID=Q5GWI0_XANOR
Phenol hydroxylase {ECO:0000313|EMBL:AAW76941.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
SCNpilot_expt_1000_bf_scaffold_5832_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5543..6223
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DKL3_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06117.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_expt_1000_bf_scaffold_5832_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6231..7124)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037F9687 rbh
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCV13252.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_5832_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7219..8094
DNA (876bp) protein (292aa)
Putative aldo/keto reductase, NAD(P)-binding n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAC8_9RHIZ rbh
Putative aldo/keto reductase, NAD(P)-binding {ECO:0000313|EMBL:CCV13251.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
aldo-keto reductase family protein rbh
SCNpilot_expt_1000_bf_scaffold_5832_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8130..9134)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CMF3_VARPS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_expt_1000_bf_scaffold_5832_11
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9217..9477)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00036FD692
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ07481.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_5832_12
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9541..9921)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003687FA0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50059.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_expt_1000_bf_scaffold_5832_13
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9984..10427)
DNA (444bp) protein (148aa)
ADP-ribose pyrophosphatase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ76_9RHIZ
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EIM26118.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
NUDIX hydrolase
SCNpilot_expt_1000_bf_scaffold_5832_14
Brucella pinnipedialis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10438..11001)
DNA (564bp) protein (188aa)
pdxH; pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=520462 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella pinnipedialis M292/94/1.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=237 Tax=Brucella RepID=PDXH_BRUA2
SCNpilot_expt_1000_bf_scaffold_5832_15
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11201..11620
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELR2_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50056.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_expt_1000_bf_scaffold_5832_16
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11788..12177
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035DD24B
tRNA synthetase class II (G H P and S); K02502 ATP phosphoribosyltransferase regulatory subunit
tRNA synthetase class II (G H P and S) {ECO:0000313|EMBL:ACK49774.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Displaying 16 items

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