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SCNpilot_expt_1000_bf_scaffold_20737

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_20737_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(52..975)
DNA (924bp) protein (308aa)
hypothetical protein, partial n=1 Tax=Variovorax paradoxus RepID=UPI0003661C33 rbh
Cycloisomerase {ECO:0000313|EMBL:KGM33642.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_20737_2
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1029..1520
DNA (492bp) protein (164aa)
UPI0003CFBAC1 related cluster n=1 Tax=unknown RepID=UPI0003CFBAC1
Uncharacterized protein {ECO:0000313|EMBL:ESZ16117.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_20737_3
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1598..1951)
DNA (354bp) protein (118aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVF7_9PROT
LysR substrate binding domain protein {ECO:0000313|EMBL:EHM03030.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_20737_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2591..3613
DNA (1023bp) protein (341aa)
Sodium/bile acid symporter family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVF6_9PROT rbh
Sodium/bile acid symporter family protein {ECO:0000313|EMBL:EHM03029.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
bile acid:sodium symporter; K14347 solute carrier family 10 (sodium/bile acid cotransporter), member 7 rbh
SCNpilot_expt_1000_bf_scaffold_20737_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3802..4344
DNA (543bp) protein (181aa)
MnbD n=1 Tax=Comamonas sp. JS46 RepID=Q5GDA1_9BURK
Trap dicarboxylate transporter, dctp subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_20737_6
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..4856
DNA (516bp) protein (172aa)
MnbD n=1 Tax=Comamonas sp. JS46 RepID=Q5GDA1_9BURK
Trap dicarboxylate transporter, dctp subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_expt_1000_bf_scaffold_20737_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4937..5917
DNA (981bp) protein (327aa)
MnbD n=1 Tax=Comamonas sp. JS46 RepID=Q5GDA1_9BURK
Trap dicarboxylate transporter, dctp subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_expt_1000_bf_scaffold_20737_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6102..6710
DNA (609bp) protein (203aa)
MnbD n=1 Tax=Comamonas sp. JS46 RepID=Q5GDA1_9BURK
Trap dicarboxylate transporter, dctp subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_expt_1000_bf_scaffold_20737_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6724..7137
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031A797F
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_20737_10
unknown

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7186..7272
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 10 items

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