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SCNpilot_expt_1000_bf_scaffold_4267

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4267_1
unknown

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1..462
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4267_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(491..1276)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003791719
Capsular polysaccharide ABC transporter, permease protein KpsM {ECO:0000313|EMBL:ENN85621.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative polysaccharide ABC exporter, permease protein
SCNpilot_expt_1000_bf_scaffold_4267_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1283..2578)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003680234 rbh
Putative KpsE/CtrB/VexD-like capsular polysaccharide export protein {ECO:0000313|EMBL:ENN85920.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
lipopolysaccharide biosynthesis protein; K10107 capsular polysaccharide transport system permease protein
SCNpilot_expt_1000_bf_scaffold_4267_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2586..3617)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003647D88
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70771.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_4267_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3617..4885)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037752DF rbh
Putative KpsE/CtrB/VexD-like capsular polysaccharide export protein {ECO:0000313|EMBL:ENN85918.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative KpsE/CtrB/VexD-like capsular polysaccharide export protein
SCNpilot_expt_1000_bf_scaffold_4267_6
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4898..5551)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003764118 rbh
Putative capsule polysaccharide export ATP-binding protein {ECO:0000313|EMBL:GAK71872.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
putative RkpS/KpsT/CtrD/VexC-like capsular polysaccharide export, ATP-binding component
SCNpilot_expt_1000_bf_scaffold_4267_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5940..6518
DNA (579bp) protein (193aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYN8_RHOCS
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KFC63294.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_4267_8
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6518..6877
DNA (360bp) protein (120aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Pseudomonas sp. GM48 RepID=J2SAL2_9PSED
Displaying 8 items

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