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SCNpilot_expt_1000_bf_scaffold_4296

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4296_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..522)
DNA (522bp) protein (174aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJZ1_9BRAD
Transcriptional regulatory protein {ECO:0000313|EMBL:EGP08160.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4296_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1046..3025
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWR1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31860.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
TonB-dependent receptor rbh
SCNpilot_expt_1000_bf_scaffold_4296_3
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3019..3387
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHG6_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA19392.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_4296_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3384..4616
DNA (1233bp) protein (411aa)
AmpG permease n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJZ4_9BRAD rbh
AmpG permease {ECO:0000313|EMBL:EGP08163.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
RhtX/FptX family siderophore transporter rbh
SCNpilot_expt_1000_bf_scaffold_4296_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4613..5314)
DNA (702bp) protein (234aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CE517
SCNpilot_expt_1000_bf_scaffold_4296_6
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5366..6682)
DNA (1317bp) protein (439aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
Gamma-glutamyl phosphate reductase {ECO:0000255|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000255|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00412}; Short=GSA dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00412};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia
gamma-glutamyl phosphate reductase n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036A6BC5 rbh
SCNpilot_expt_1000_bf_scaffold_4296_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6798..7721)
DNA (924bp) protein (308aa)
Cation efflux protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWX1_9BRAD rbh
Cation efflux protein {ECO:0000313|EMBL:EAQ35517.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
cation diffusion facilitator family transporter rbh
SCNpilot_expt_1000_bf_scaffold_4296_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7747..8022)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJA2_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68095.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_4296_9
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8137..9567)
DNA (1431bp) protein (477aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
aldehyde dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000380599D rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJC49265.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Displaying 9 items

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