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SCNpilot_expt_1000_bf_scaffold_4735

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4735_1
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..492
DNA (492bp) protein (164aa)
Omega amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:ESQ93894.1}; EC=2.6.1.18 {ECO:0000313|EMBL:ESQ93894.1};; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
class III aminotransferase; K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18]
Omega amino acid--pyruvate aminotransferase n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4Q2H4_9CAUL
SCNpilot_expt_1000_bf_scaffold_4735_2
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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600..1727
DNA (1128bp) protein (376aa)
Putative FMNH2-dependent dimethyl sulfone monooxygenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WFN5_9ACTO
Luciferase-like domain-containing flavin monooxygenase {ECO:0000313|EMBL:AHH19919.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4735_3
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1736..2698)
DNA (963bp) protein (321aa)
MFS transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FB2F4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_expt_1000_bf_scaffold_4735_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2751..3806)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00035DD6C6
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_expt_1000_bf_scaffold_4735_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3894..4673
DNA (780bp) protein (260aa)
IclR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361392C
Transcriptional regulator {ECO:0000313|EMBL:GAD23017.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
IclR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4735_6
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4943..6250
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YXB9_BRASO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAL78545.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_expt_1000_bf_scaffold_4735_7
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6383..7477
DNA (1095bp) protein (365aa)
Putative oxidoreductase NAD(FAD)-dependent dehydrogenases n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YXC0_BRASO rbh
oxidoreductase/NAD(FAD)-dependent dehydrogenases rbh
Putative oxidoreductase NAD(FAD)-dependent dehydrogenases {ECO:0000313|EMBL:CAL78546.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_expt_1000_bf_scaffold_4735_8
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7474..8271
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TSC6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE09364.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
thioesterase
SCNpilot_expt_1000_bf_scaffold_4735_9
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8849..9496)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037C7745
Cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:CCJ06597.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_4735_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9578..9982)
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Methylmalonyl-CoA epimerase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZYN0_RHILW
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KGD99561.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_expt_1000_bf_scaffold_4735_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9983..10525)
DNA (543bp) protein (181aa)
Beta-lactamase domain protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHV1_BEII9
beta-lactamase domain-containing protein; K07021
Beta-lactamase domain protein {ECO:0000313|EMBL:ACB95994.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_expt_1000_bf_scaffold_4735_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10522..11655)
DNA (1134bp) protein (378aa)
Beta-lactamase domain protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIN2_METSB
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:KFC69018.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
beta-lactamase domain-containing protein; K07021
SCNpilot_expt_1000_bf_scaffold_4735_13
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11652..12431)
DNA (780bp) protein (260aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHV2_BEII9
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ACB95995.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_expt_1000_bf_scaffold_4735_14
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12464..13897)
DNA (1434bp) protein (478aa)
proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIN0_METSB rbh
SCNpilot_expt_1000_bf_scaffold_4735_15
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13908..14267)
DNA (360bp) protein (120aa)
nuoM; proton-translocating NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I subunit M) (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0C0_9RHIZ
NADH-quinone oxidoreductase chain 13 {ECO:0000313|EMBL:KFG68173.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Displaying 15 items

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