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SCNpilot_expt_1000_bf_scaffold_7561

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7561_1
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1174)
DNA (1173bp) protein (391aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
alanyl-tRNA synthetase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FD9F16
SCNpilot_expt_1000_bf_scaffold_7561_2
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1750..2817)
DNA (1068bp) protein (356aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA rbh
recombinase RecA n=1 Tax=Methylocystis parvus RepID=UPI000365539B rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_expt_1000_bf_scaffold_7561_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3176..3667
DNA (492bp) protein (164aa)
UPI0003D1C874 related cluster n=1 Tax=unknown RepID=UPI0003D1C874
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EPX64556.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
transcriptional regulator, MarR family
SCNpilot_expt_1000_bf_scaffold_7561_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3664..4602)
DNA (939bp) protein (313aa)
rieske [2Fe-2S] domain-containing protein 5; K03862 vanillate monooxygenase [EC:1.14.13.82]
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FD41DE rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_expt_1000_bf_scaffold_7561_5
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4605..5588)
DNA (984bp) protein (328aa)
Putative sulfonate transport system substrate-binding protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQ81_9RHIZ
Putative sulfonate transport system substrate-binding protein {ECO:0000313|EMBL:EIM71733.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
putative sulfonate transport system substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Displaying 5 items

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