ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7909

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7909_1
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..433)
DNA (432bp) protein (144aa)
Putative MFS transporter n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H7B0_ACTM4
putative MFS transporter
Putative MFS transporter {ECO:0000313|EMBL:BAL88897.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_expt_1000_bf_scaffold_7909_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(544..1365)
DNA (822bp) protein (274aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
D-amino acid dehydrogenase small subunit; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino acid dehydrogenase small subunit n=1 Tax=Hoeflea sp. 108 RepID=UPI000369DFC5
SCNpilot_expt_1000_bf_scaffold_7909_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1440..1772)
DNA (333bp) protein (111aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
D-amino acid dehydrogenase small subunit; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino acid dehydrogenase small subunit n=1 Tax=Hoeflea sp. 108 RepID=UPI000369DFC5
SCNpilot_expt_1000_bf_scaffold_7909_4
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1794..1973)
DNA (180bp) protein (60aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
alanine racemase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039B4BAA
SCNpilot_expt_1000_bf_scaffold_7909_5
unknown

Not on your lists

2241..2447
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7909_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3019..3483
DNA (465bp) protein (155aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2WE62_9RHIZ
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AHK45325.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
HTH-type transcriptional regulator y4sM
SCNpilot_expt_1000_bf_scaffold_7909_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3490..4023)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MFI2_RHIL3
ATPase {ECO:0000313|EMBL:KGM34843.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7909_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4175..5473
DNA (1299bp) protein (433aa)
amidohydrolase; K01487 guanine deaminase [EC:3.5.4.3] rbh
Guanine deaminase {ECO:0000313|EMBL:ABQ30360.1}; EC=3.5.4.3 {ECO:0000313|EMBL:ABQ30360.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Guanine deaminase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXM8_ACICJ rbh
SCNpilot_expt_1000_bf_scaffold_7909_9
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5581..7173
DNA (1593bp) protein (531aa)
putative alkaline phosphatase; K01113 alkaline phosphatase D [EC:3.1.3.1] rbh
Putative alkaline phosphatase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WPH5_9RHIZ rbh
Putative alkaline phosphatase {ECO:0000313|EMBL:EIZ82268.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
SCNpilot_expt_1000_bf_scaffold_7909_10
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7310..8902
DNA (1593bp) protein (531aa)
putative alkaline phosphatase; K01113 alkaline phosphatase D [EC:3.1.3.1]
Putative alkaline phosphatase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WPH5_9RHIZ
Putative alkaline phosphatase {ECO:0000313|EMBL:EIZ82268.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
SCNpilot_expt_1000_bf_scaffold_7909_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8913..10595)
DNA (1683bp) protein (561aa)
Cl-channel voltage-gated family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y290_9RHIZ
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:EHH14073.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Cl-channel voltage-gated family protein; K03281 chloride channel protein, CIC family
SCNpilot_expt_1000_bf_scaffold_7909_12
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10764..13301)
DNA (2538bp) protein (846aa)
Putative bacteriophytochrome n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GD33_9BRAD
putative bacteriophytochrome
Putative bacteriophytochrome {ECO:0000313|EMBL:BAL78670.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_expt_1000_bf_scaffold_7909_13
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13298..13882)
DNA (585bp) protein (195aa)
Putative heme oxygenase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T1B9_9BRAD
Putative heme oxygenase {ECO:0000313|EMBL:CCE00246.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
heme oxygenase; K07215 heme oxygenase
SCNpilot_expt_1000_bf_scaffold_7909_14
unknown

Not on your lists

comp(14187..14330)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 14 items

View Taxonomy