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SCNpilot_expt_1000_bf_scaffold_12268

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12268_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..662
DNA (660bp) protein (220aa)
Pilus (Caulobacter type) biogenesis lipoprotein CpaD n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QJU9_METTR
pilus biogenesis lipoprotein CpaD; K02281 pilus assembly protein CpaD
Pilus biogenesis lipoprotein CpaD {ECO:0000313|EMBL:ACI57451.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_12268_2
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1179..1904
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037CD3E6
response regulator receiver protein; K02282 pilus assembly protein CpaE
Response regulator receiver protein {ECO:0000313|EMBL:ACA16840.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_12268_3
unknown

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comp(1961..2440)
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12268_4
unknown

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comp(2952..3272)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12268_5
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3410..4348
DNA (939bp) protein (313aa)
pilus assembly protein n=1 Tax=Methylocystis parvus RepID=UPI0003101F57 rbh
type II secretion system protein; K12510 tight adherence protein B
Type II secretion system protein {ECO:0000313|EMBL:ACK83546.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
SCNpilot_expt_1000_bf_scaffold_12268_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4360..5334
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003152DFB
Putative pilus assembly protein membrane protein {ECO:0000313|EMBL:KFC70941.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Type II secretion system F domain; K12511 tight adherence protein C
SCNpilot_expt_1000_bf_scaffold_12268_7
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5380..6297)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036B6F6B rbh
TadD protein {ECO:0000313|EMBL:BAQ48616.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
signal peptide
SCNpilot_expt_1000_bf_scaffold_12268_8
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6516..6923
DNA (408bp) protein (136aa)
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
Leucine aminopeptidase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SDW8_9BRAD
leucine aminopeptidase
Displaying 8 items

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