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SCNpilot_expt_1000_bf_scaffold_12711

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12711_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..722)
DNA (720bp) protein (240aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRM7_VARPS
Variovorax paradoxus strain MEDvA23 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33934.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
mandelate racemase/muconate lactonizing protein
SCNpilot_expt_1000_bf_scaffold_12711_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(946..1425)
DNA (480bp) protein (160aa)
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037DA3EE
Variovorax paradoxus strain MEDvA23 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33933.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
transcriptional regulator, LysR family
SCNpilot_expt_1000_bf_scaffold_12711_3
unknown

Not on your lists

1600..1788
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12711_4
bacterium YEK0313, Bacteria

Not on your lists

comp(1954..2439)
DNA (486bp) protein (162aa)
cyclase n=1 Tax=Xanthobacteraceae RepID=UPI00036E3241
Ribosome association toxin RatA {ECO:0000313|EMBL:CEJ12996.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
cyclase/dehydrase
SCNpilot_expt_1000_bf_scaffold_12711_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2530..2760)
DNA (231bp) protein (77aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZM2_STAND
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADH91217.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_expt_1000_bf_scaffold_12711_6
bacterium YEK0313, Bacteria

Not on your lists

comp(2699..3178)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037F6A40
Putative L,D-transpeptidase ErfK/SrfK {ECO:0000313|EMBL:CEJ12848.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_1000_bf_scaffold_12711_7
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3319..3756)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00036BA3B5
Pirin {ECO:0000313|EMBL:KEO81301.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
pirin; K06911
SCNpilot_expt_1000_bf_scaffold_12711_8
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3695..3982)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035C2D26
Pirin {ECO:0000313|EMBL:KEO81301.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
pirin family protein
SCNpilot_expt_1000_bf_scaffold_12711_9
unknown

Not on your lists

4323..4493
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12711_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4696..5481
DNA (786bp) protein (262aa)
Methyltransferase family protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L5L7_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89076.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_expt_1000_bf_scaffold_12711_11
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5681..7279
DNA (1599bp) protein (533aa)
3-(3-hydroxyphenyl)propionate hydroxylase (EC:1.14.13.-); K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] rbh
hypothetical protein n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI000362BAA4 rbh
FAD-binding protein {ECO:0000313|EMBL:KFG00792.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
SCNpilot_expt_1000_bf_scaffold_12711_12
unknown

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7537..8043
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12711_13
unknown

Not on your lists

8949..9089
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12711_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9204..10145
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002F9D7A4
methyltransferase FkbM
Methyltransferase, FkbM family domain protein {ECO:0000313|EMBL:KFE71494.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
SCNpilot_expt_1000_bf_scaffold_12711_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10283..11200)
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LLV9_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF18749.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_12711_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11302..12495
DNA (1194bp) protein (398aa)
Arabinose efflux permease family protein n=1 Tax=Rhizobium sp. CF080 RepID=J2HFX2_9RHIZ rbh
Putative efflux protein MFS family {ECO:0000313|EMBL:CDX25484.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transmembrane efflux protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
SCNpilot_expt_1000_bf_scaffold_12711_17
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12459..13142)
DNA (684bp) protein (228aa)
LysR family transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWL3_TISMK
cmpR; LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFK57151.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_expt_1000_bf_scaffold_12711_18
bacterium YEK0313, Bacteria

Not on your lists

13474..14034
DNA (561bp) protein (187aa)
phosphinothricin N-acetyltransferase (antibiotic resistance) protein; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
Phosphinothricin N-acetyltransferase (Antibiotic resistance) protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKE7_AGRRK
N-acyltransferase YncA {ECO:0000313|EMBL:CEJ15685.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_expt_1000_bf_scaffold_12711_19
unknown

Not on your lists

comp(14191..14922)
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12711_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15199..15768)
DNA (570bp) protein (190aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A250_DEIPD
oxidoreductase, aryl-alcohol dehydrogenase like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_expt_1000_bf_scaffold_12711_21
unknown

Not on your lists

15881..16114
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12711_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16306..16770
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU77_9RHIZ
Putative lipoprotein {ECO:0000313|EMBL:KFC71599.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12711_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16784..17434
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU78_9RHIZ rbh
ErfK/YbiS/YcfS/YnhG-like protein {ECO:0000313|EMBL:KFC71600.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_1000_bf_scaffold_12711_24
bacterium YEK0313, Bacteria

Not on your lists

17455..18474
DNA (1020bp) protein (340aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU79_9RHIZ rbh
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:CEJ11081.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
family 3 extracellular solute-binding protein
SCNpilot_expt_1000_bf_scaffold_12711_25
unknown

Not on your lists

18638..18817
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 25 items

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