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SCNpilot_expt_1000_bf_scaffold_16069

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_16069_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..130
DNA (129bp) protein (43aa)
Putative thiolase/acetyl-CoA acetyltransferase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EGR6_BRASB
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KJC56133.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
thiolase/acetyl-CoA acetyltransferase
SCNpilot_expt_1000_bf_scaffold_16069_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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744..1340
DNA (597bp) protein (199aa)
Short chain dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNG9_BRAJP
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC42158.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
short chain dehydrogenase
SCNpilot_expt_1000_bf_scaffold_16069_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1369..2160
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGB9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05507.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_16069_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2326..3975)
DNA (1650bp) protein (550aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Rhizobium sp. CF080 RepID=J3CGQ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJC42199.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_expt_1000_bf_scaffold_16069_5
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4123..4833
DNA (711bp) protein (237aa)
Putative crotonobetaine/carnitine-CoA ligase {ECO:0000313|EMBL:CCE05505.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CCE05505.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
crotonobetaine/carnitine-CoA ligase (EC:6.3.2.-); K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
Putative crotonobetaine/carnitine-CoA ligase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGB7_9BRAD
SCNpilot_expt_1000_bf_scaffold_16069_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5405..5659
DNA (255bp) protein (85aa)
crotonobetaine/carnitine-CoA ligase (EC:6.3.2.-); K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
Putative crotonobetaine/carnitine-CoA ligase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGB7_9BRAD
Crotonobetainyl-CoA:carnitine CoA-transferase {ECO:0000313|EMBL:KJC56204.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_expt_1000_bf_scaffold_16069_7
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5724..6239)
DNA (516bp) protein (172aa)
Putative Transcriptional regulatory protein, MarR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGB6_9BRAD
Putative Transcriptional regulatory protein, MarR family {ECO:0000313|EMBL:CCE05504.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_16069_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6540..7028
DNA (489bp) protein (163aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7T8_9RHOB
Thioesterase superfamily protein {ECO:0000313|EMBL:CDP51305.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCNpilot_expt_1000_bf_scaffold_16069_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7710..8255
DNA (546bp) protein (182aa)
Branched-chain amino acid transporter n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNG7_BRAJP
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC56206.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
branched-chain amino acid transporter; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_16069_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8442..10151
DNA (1710bp) protein (570aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000313|EMBL:CDP51311.1}; EC=1.2.7.8 {ECO:0000313|EMBL:CDP51311.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
indolepyruvate ferredoxin oxidoreductase; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
indolepyruvate ferredoxin subunit alpha n=1 Tax=Martelella mediterranea RepID=UPI000376D18B
Displaying 10 items

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