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SCNpilot_expt_1000_bf_scaffold_24426

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_24426_1
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..155)
DNA (153bp) protein (51aa)
50S ribosomal protein L32 n=2 Tax=Methylobacterium RepID=RL32_METNO
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_24426_2
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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720..1346
DNA (627bp) protein (209aa)
polyprenyl synthetase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000378FA43
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:CCJ07014.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_1000_bf_scaffold_24426_3
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1364..2104
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QSY4_METTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB94075.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_expt_1000_bf_scaffold_24426_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2101..2937)
DNA (837bp) protein (279aa)
LysR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035DE8CD rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR76061.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_24426_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3028..3765
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNU5_9PROT rbh
Permease {ECO:0000313|EMBL:ETR76062.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_24426_6
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4102..5283
DNA (1182bp) protein (394aa)
peptidase S13, D-Ala-D-Ala carboxypeptidase C; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Putative D-alanyl-D-alanine carboxypeptidase n=2 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLV1_MOBAS rbh
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KFG69573.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_expt_1000_bf_scaffold_24426_7
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5488..6129)
DNA (642bp) protein (214aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ER39_METSB
Displaying 7 items

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