ggKbase home page

SCNpilot_expt_1000_bf_scaffold_19639_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 555..860

Top 3 Functional Annotations

Value Algorithm Source
microcin C ABC transporter ATP-binding protein YejF n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003829F9D similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 91.0
  • Bit_score: 148
  • Evalue 3.80e-33
putative oligopeptide transport protein (ABC superfamily, atp_bind) similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 91.0
  • Bit_score: 146
  • Evalue 4.60e-33
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGE84238.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 91.0
  • Bit_score: 146
  • Evalue 2.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCGCTGGAACCGCAATTCGTCGTGCTCGATGAGCCGACTTCAGCGCTTGATATGTCAGTACAGGCGCAGATCGTCGAACTGCTGCGCGAGCTGCAATCGCGCCGCAAGCTCGCCTATATGTTCATCAGCCATGATTTGAAGGTGGTGCGGGCGCTCGCCTCCGACATCATCGTCATGCGTCATGGCAAGGTGGTGGAGCAGGGGCCGGCGGCGGATGTGTTCGCCGCGCCGCAGAGCGACTATACGCGCACGCTCTTTGCCGCCGCTTTTCTTCACACGACAGGCACCGTCGCGTCGTCTTGA
PROTEIN sequence
Length: 102
MALEPQFVVLDEPTSALDMSVQAQIVELLRELQSRRKLAYMFISHDLKVVRALASDIIVMRHGKVVEQGPAADVFAAPQSDYTRTLFAAAFLHTTGTVASS*